transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation by Fallon, Timothy R., Čalounová, Tereza, Mokrejš, Martin, Weng, Jing-Ke, Pluskal, Tomáš

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Compensatory remodeling of a septo-hippocampal GABAergic network in the triple transgenic Alzheimer’s mouse model by Wander, Connor M., Li, Ya-Dong, Bao, Hechen, Asrican, Brent, Luo, Yan-Jia, Sullivan, Heather A., Chao, Tzu-Hao H., Zhang, Wei-Ting, Chéry, Samantha L., Tart, Dalton S., Chen, Ze-Ka, Shih, Yen-Yu I., Wickersham, Ian R., Cohen, Todd J., Song, Juan

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Stabilization and improved functionality of three-dimensional perfusable microvascular networks in microfluidic devices under macromolecular crowding by Wan, Ho-Ying, Chen, Jack C. H., Xiao, Qinru, Wong, Christy W., Yang, Boguang, Cao, Benjamin, Tuan, Rocky S., Nilsson, Susan K., Ho, Yi-Ping, Raghunath, Michael, Kamm, Roger D., Blocki, Anna

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In-Vivo fluorescent nanosensor implants based on hydrogel-encapsulation: investigating the inflammation and the foreign-body response by Lee, Michael A., Jin, Xiaojia, Muthupalani, Sureshkumar, Bakh, Naveed A., Gong, Xun, Strano, Michael S.

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A statistical approach for identifying primary substrates of ZSWIM8-mediated microRNA degradation in small-RNA sequencing data by Wang, Peter Y., Bartel, David P.

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Transcriptional diversity in specific synaptic gene sets discriminates cortical neuronal identity by Roig Adam, Amparo, Martínez-López, José A., van der Spek, Sophie J. F., Sullivan, Patrick F., Smit, August B., Verhage, Matthijs, Hjerling-Leffler, Jens

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A comprehensive analysis of different types of databases reveals that CDH1 mRNA and E-cadherin protein are not downregulated in most carcinoma tissues and carcinoma cell lines by Sicairos, Brihget, Alam, Shorna, Du, Yuchun

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A comparison of point-tracking algorithms in ultrasound videos from the upper limb by Magana-Salgado, Uriel, Namburi, Praneeth, Feigin-Almon, Micha, Pallares-Lopez, Roger, Anthony, Brian

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Impact of macrolide treatment on long-term mortality in patients admitted to the ICU due to CAP: a targeted maximum likelihood estimation and survival analysis by Reyes, Luis F., Garcia, Esteban, Ibáñez-Prada, Elsa D., Serrano-Mayorga, Cristian C., Fuentes, Yuli V., Rodríguez, Alejandro, Moreno, Gerard, Bastidas, Alirio, Gómez, Josep, Gonzalez, Angélica, Frei, Christopher R., Celi, Leo A., Martin-Loeches, Ignacio, Waterer, Grant

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Genomic approaches to identify and investigate genes associated with atrial fibrillation and heart failure susceptibility by Patel, Kush K., Venkatesan, Cynthia, Abdelhalim, Habiba, Zeeshan, Saman, Arima, Yuichiro, Linna-Kuosmanen, Suvi, Ahmed, Zeeshan

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kboolnet: a toolkit for the verification, validation, and visualization of reaction-contingency (rxncon) models by Carretero Chavez, Willow, Krantz, Marcus, Klipp, Edda, Kufareva, Irina

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In-silico molecular designs to treat neurologic and ophthalmologic diseases caused by sorbitol excess: engineering the Agrobacterium vitis protein by Sharma, Shonit N., Hojati, Ashkhan, Gnanasambandam, Bhargavee, Yerrabelli, Rahul S., Brozek, Joshua

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Pairwise comparative analysis of six haplotype assembly methods based on users’ experience by Sun, Shuying, Cheng, Flora, Han, Daphne, Wei, Sarah, Zhong, Alice, Massoudian, Sherwin, Johnson, Alison B.

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A topology-marginal composite likelihood via a generalized phylogenetic pruning algorithm by Jun, Seong-Hwan, Nasif, Hassan, Jennings-Shaffer, Chris, Rich, David H., Kooperberg, Anna, Fourment, Mathieu, Zhang, Cheng, Suchard, Marc A., Matsen, Frederick A.

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SCA: recovering single-cell heterogeneity through information-based dimensionality reduction by DeMeo, Benjamin, Berger, Bonnie

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Transplanted ENSCs form functional connections with intestinal smooth muscle and restore colonic motility in nNOS-deficient mice by Hotta, Ryo, Rahman, Ahmed, Bhave, Sukhada, Stavely, Rhian, Pan, Weikang, Srinivasan, Shriya, de Couto, Geoffrey, Rodriguez-Borlado, Luis, Myers, Richard, Burns, Alan J., Goldstein, Allan M.

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estimateR: an R package to estimate and monitor the effective reproductive number by Scire, Jérémie, Huisman, Jana S., Grosu, Ana, Angst, Daniel C., Lison, Adrian, Li, Jinzhou, Maathuis, Marloes H., Bonhoeffer, Sebastian, Stadler, Tanja

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A user-centred implementation strategy for tuberculosis contact investigation in Uganda: protocol for a stepped-wedge, cluster-randomised trial by Katamba, Achilles, Gupta, Amanda J., Turimumahoro, Patricia, Ochom, Emmanuel, Ggita, Joseph M., Nakasendwa, Suzan, Nanziri, Leah, Musinguzi, Johnson, Hennein, Rachel, Sekadde, Moorine, Hanrahan, Colleen, Byaruhanga, Raymond, Yoeli, Erez, Turyahabwe, Stavia, Cattamanchi, Adithya

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Fairness and generalizability of OCT normative databases: a comparative analysis by Nakayama, Luis F., Zago Ribeiro, Lucas, de Oliveira, Juliana A. E., de Matos, João C. R. G., Mitchell, William G., Malerbi, Fernando K., Celi, Leo A., Regatieri, Caio V. S.

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Financing repurposed drugs for rare diseases: a case study of Unravel Biosciences by Abouarab, Bechara, Bazarian, Christian, Ben Chaouch, Zied, Lo, Andrew W., Mourenza Gonzalez, Guillermo, Novak, Richard, Vigneault, Frederic

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