FASTQSim: platform-independent data characterization and in silico read generation for NGS datasets by Shcherbina, Anna

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Aging exacerbates damage and delays repair of alveolar epithelia following influenza viral pneumonia by Yin, Lu, Zheng, Dahai, Limmon, Gino V., Leung, Nicola H. N., Xu, Shuoyu, Rajapakse, Jagath C., Yu, Hanry, Chow, Vincent T. K., Chen, Jianzhu

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Genome analysis of a major urban malaria vector mosquito, Anopheles stephensi by Jiang, Xiaofang, Peery, Ashley, Hall, A. B., Sharma, Atashi, Chen, Xiao-Guang, Komissarov, Aleksey, Riehle, Michelle M., Shouche, Yogesh, Sharakhova, Maria V., Lawson, Daniel, Pakpour, Nazzy, Arensburger, Peter, Davidson, Victoria L. M., Eiglmeier, Karin, Emrich, Scott J., George, Phillip, Kennedy, Ryan C., Mane, Shrinivasrao P., Maslen, Gareth, Oringanje, Chioma, Qi, Yumin, Settlage, Robert, Tojo, Marta, Tubio, Jose M. C., Unger, Maria F., Wang, Bo, Vernick, Kenneth D., Ribeiro, Jose M. C., James, Anthony A., Michel, Kristin, Riehle, Michael A., Luckhart, Shirley, Sharakhov, Igor V., Tu, Zhijian, Waterhouse, Robert

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Understanding the complex-I-ty of metformin action: limiting mitochondrial respiration to improve cancer therapy by Luengo, Alba, Sullivan, Lucas Bryan, Vander Heiden, Matthew G.

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Autonomous exoskeleton reduces metabolic cost of human walking by Mooney, Luke M., Rouse, Elliott J., Herr, Hugh M

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Mitochondrial reactive oxygen species and cancer by Chandel, Navdeep S, Sullivan, Lucas Bryan

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The genome of the intracellular bacterium of the coastal bivalve, Solemya velum: a blueprint for thriving in and out of symbiosis by Dmytrenko, Oleg, Russell, Shelbi L., Loo, Wesley T., Liao, Li, Roeselers, Guus, Sharma, Raghav, Stewart, Frank J., Newton, Irene L. G., Woyke, Tanja, Wu, Dongying, Lang, Jenna Morgan, Eisen, Jonathan A., Cavanaugh, Colleen M., Fontanez, Kristina M.

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Acetate metabolism in cancer cells by Hosios, Aaron M, Vander Heiden, Matthew G.

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Y MAP: a pipeline for visualization of copy number variation and loss of heterozygosity in eukaryotic pathogens by Abbey, Darren A., Funt, Jason, Lurie-Weinberger, Mor N., Thompson, Dawn A., Regev, Aviv, Myers, Chad L., Berman, Judith

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A genomic and evolutionary approach reveals non-genetic drug resistance in malaria by Rice, Daniel P., Ribacke, Ulf, Silterra, Jacob, Deik, Amy A., Moss, Eli L., Broadbent, Kate M., Neafsey, Daniel E., Desai, Michael M., Clish, Clary, Mazitschek, Ralph, Wirth, Dyann F., Herman, Jonathan D.

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Succinate dehydrogenase inhibition leads to epithelial-mesenchymal transition and reprogrammed carbon metabolism by Aspuria, Paul-Joseph P., Lunt, Sophia Yunkyungkwon, Väremo, Leif, Vergnes, Laurent, Gozo, Maricel, Beach, Jessica A, Salumbides, Brenda, Reue, Karen, Wiedemeyer, W. R., Nielsen, Jens Kromann, Karlan, Beth Y., Orsulic, Sandra

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Meeting report for the 1st skin microbiota workshop, Boulder, CO October 15-16 2012 by Gilbert, Jack A., Ball, Madeleine, Blainey, Paul C., Blaser, Martin J., Bohannan, Brendan J. M., Bateman, Ashley, Bunge, John, Dominguez-Bello, Maria G., Epstein, Slava, Fierer, Noah, Gevers, Dirk, Grikscheit, Tracy, Hamdan, Leila J., Harvey, James, Huttenhower, Curtis, Kirkup, Benjamin, Kong, Heidi H., Lauber, Christian, Lemon, Katherine P., Lynch, Susan V., Martin, Lance, Mello, Charlene, Palma, Joseph, Parker, Roy, Petrosino, Joseph, Segre, Julia A., Vosshall, Leslie, Yi, Rui, Knight, Rob

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DFBAlab: a fast and reliable MATLAB code for dynamic flux balance analysis by Gomez, Jose Alberto, Hoeffner, Kai, Barton, Paul I.

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MAGeCK enables robust identification of essential genes from genome-scale CRISPR/Cas9 knockout screens by Li, Wei, Xu, Han, Xiao, Tengfei, Cong, Le, Love, Michael I., Zhang, Feng, Irizarry, Rafael A., Liu, Jun S., Brown, Myles, Liu, X. Shirley

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Human mesenchymal stem cells/multipotent stromal cells consume accumulated autophagosomes early in differentiation by Nuschke, Austin, Rodrigues, Melanie, Stolz, Donna B, Chu, Charleen T, Wells, Alan, Griffith, Linda G.

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Laboratory experiments on stranding of Anopheles larvae under different shoreline environmental conditions by Endo, Noriko, Kiszewski, Anthony E, Eltahir, Elfatih A. B.

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Engineering E. coli–E. coli cocultures for production of muconic acid from glycerol by Zhang, Haoran, Li, Zhengjun, Stephanopoulos, Gregory, Pereira, Brian J.

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Global research alliance in infectious disease: a collaborative effort to combat infectious diseases through dissemination of portable sequencing by Runtuwene, Lucky R., Sathirapongsasuti, Nuankanya, Srisawat, Raweewan, Komalamisra, Narumon, Tuda, Josef S. B., Mongan, Arthur E., Aboge, Gabriel O, Shabardina, Victoria, Makalowski, Wojciech, Nesti, Dela Ria, Artama, Wayan T, Nguyen‑Thi, Lan Anh, Wan, Kiew‑Lian, Na, Byoung‑Kuk, Hall, William, Pain, Arnab, Eshita, Yuki, Maeda, Ryuichiro, Yamagishi, Junya, Suzuki, Yutaka

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Growth of exclusively breastfed small for gestational age term infants in the first six months of life: a prospective cohort study by Nurani, Neti, Wibowo, Tunjung, Susilowati, Rina, Hastuti, Janatin, Julia, Madarina, Van Weissenbruch, Mirjam M.

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Effectiveness and predictors of conversion in mini‑laparotomy cholecystectomy in developing country: a cohort retrospective study by Handaya, Adeodatus Yahya, Andrew, Joshua, Hanif, Ahmad Shafa, Tjendra, Kevin Radinal, Aditya, Azriel Farrel Kresna

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