SeqAcademy: an educational pipeline for RNA-Seq and ChIP-Seq analysis [version 4; peer review: 2 approved, 1 not approved] by Syed Hussain Ather, Olaitan Igbagbo Awe, Thomas J. Butler, Tamiru Denka, Stephen Andrew Semick, Wanhu Tang, Ben Busby

“…This user-friendly pipeline, fully written in markdown language, emphasizes the use of publicly available RNA-Seq and ChIP-Seq data and strings together popular tools that bridge that gap between raw sequencing reads and biological insight. …”
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Computational analyses identify addiction help-seeking behaviors on the social networking website Reddit: Insights into online social interactions and addiction support communities by Danny Valdez, Megan S. Patterson

“…We applied several classes of natural language processing (NLP) methods to analyze and visualize our data including term frequency inverse document frequency (TF-IDF) calculations, k-means clustering, and principal components analysis (PCA). …”
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Generate Analysis-Ready Data for Real-world Evidence: Tutorial for Harnessing Electronic Health Records With Advanced Informatic Technologies by Jue Hou, Rachel Zhao, Jessica Gronsbell, Yucong Lin, Clara-Lea Bonzel, Qingyi Zeng, Sinian Zhang, Brett K Beaulieu-Jones, Griffin M Weber, Thomas Jemielita, Shuyan Sabrina Wan, Chuan Hong, Tianrun Cai, Jun Wen, Vidul Ayakulangara Panickan, Kai-Li Liaw, Katherine Liao, Tianxi Cai

“…Module 1 consists of techniques for data harmonization. We use natural language processing to recognize clinical variables from RCT design documents and map the extracted variables to EHR features with description matching and knowledge networks. …”
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PENGEMBANGAN ALAT PERMAINAN EDUKATIF ( APE ) JENIS BALOK UNTUK MENINGKATKAN KUALITAS PEMBELAJARAN DI TAMAN KANAK-KANAK by Johni Dimyati

“…Method of collecting data from this research are observation, interview and documentation. …”
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Translation and cultural adaptation of Glasgow Antipsychotic Side-effects Scale (GASS) in Arabic. by Yazed AlRuthia, Hadeel Alkofide, Fahad Dakheel Alosaimi, Hisham Alkadi, Albandari Alnasser, Aliah Aldahash, Arwa Basalamah, Maryam Alarfaj

“…OBJECTIVE:The objective of the present work was to develop an Arabic language version of the Glasgow Antipsychotic Side-effect Scale (GASS). …”
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Process of economic sanctions success or failure: A neuroscience translation – To be or not to be! by Reza Aghanouri, Hedayat Sahraii

“…In this study, we reviewed the related official documents, translated the sanction process by neuroscience language, and tried to recognize the type of stress process related to different outcomes in the target countries. …”
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Understanding Gaussian noise injections in neural networks by Camuto, A

“…<p>Deep Learning (read neural networks) has emerged as one of the most exciting and powerful tools in the statistical machine learning toolbox. …”

An Approach to Develop Collaborative Virtual Labs in Modelica by Carla Martin-Villalba, Alfonso Urquia

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Test Suite Optimization Using Machine Learning Techniques: A Comprehensive Study by Abid Mehmood, Qazi Mudassar Ilyas, Muneer Ahmad, Zhongliang Shi

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Involving End Users in Adapting a Spanish Version of a Web-Based Mental Health Clinic for Young People in Colombia: Exploratory Study Using Participatory Design Methodologies by Ospina-Pinillos, Laura, Davenport, Tracey A, Navarro-Mancilla, Alvaro Andres, Cheng, Vanessa Wan Sze, Cardozo Alarcón, Andrés Camilo, Rangel, Andres M, Rueda-Jaimes, German Eduardo, Gomez-Restrepo, Carlos, Hickie, Ian B

“…ObjectiveUsing participatory design methodologies with Colombian end users (young people, their supportive others, and health professionals), this study aimed to conduct co-design workshops to culturally adapt a Web-based Mental Health eClinic (MHeC) for young people, perform one-on-one user-testing sessions to evaluate an alpha prototype of a Spanish version of the MHeC and adapt it to the Colombian context, and inform the development of a skeletal framework and alpha prototype for a Colombian version of the MHeC (MHeC-C). MethodsThis study involved the utilization of a research and development (R&D) cycle including 4 iterative phases: co-design workshops; knowledge translation; tailoring to language, culture, and place (or context); and one-on-one user-testing sessions. …”
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Text Mining the History of Medicine. by Paul Thompson, Riza Theresa Batista-Navarro, Georgios Kontonatsios, Jacob Carter, Elizabeth Toon, John McNaught, Carsten Timmermann, Michael Worboys, Sophia Ananiadou

“…However, applying TM methods to historical text can be challenging, according to differences and evolutions in vocabulary, terminology, language structure and style, compared to more modern text. …”
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Knowing what to do and how to do it: High transparency and careful curation of data and metadata by Karsten Rasmussen

“…The project builds upon DDI (Data Documentation Initiative) and also includes collaboration with the DDI Alliance on translations of DDI vocabularies through the use of ISO language tags in metadata and controlled vocabularies; this is exemplified in some screen shots. …”
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Learning evaluation in education online – evidenced based practice by Isabel CF da Cruz

“…[endif]--&gt;&lt;strong&gt;&lt;span style="font-size: 11pt; font-family: Verdana"&gt;Problem&lt;/span&gt;&lt;/strong&gt;&lt;span style="font-size: 11pt; font-family: Verdana"&gt;: what are the tools to evaluate learning in education online? &lt;strong&gt;Method:&lt;/strong&gt; integrative literature review from 2004-2009 at Scielo, Google Scholar, and Lilacs. …”
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SciKit-GStat 1.0: a SciPy-flavored geostatistical variogram estimation toolbox written in Python by M. Mälicke

“…At its core, geostatistics aims to detect, quantify, describe, analyze and model spatial covariance of observations. The variogram, a tool to describe this spatial covariance in a formalized way, is at the heart of every such method. …”
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A knowledgebase web platform for collaborative physical system modeling and simulation by Zhang, Yanshan

“…Hence, Modelica has been selected as a reference for the development of this new web document format. The new web document format which can represent simulation models and enable them to be edited via the web-based graphical tool-ProteusGWT also implements key modeling features of the Modelica language. …”
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A review of spline function procedures in R by Aris Perperoglou, Willi Sauerbrei, Michal Abrahamowicz, Matthias Schmid

“…Methods In this work, we focus on the R Language for Statistical Computing which has become a hugely popular statistics software. …”
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Text Analysis of the Speech by Master Yulin Han by Yu-Hui Chen, Jihn-Fa Jan

“…The research team members first digitized the speech data by manual listening and typing, and the total number of words in all documents exceeded 255,000 words. We used the Python programming language to develop tools for extracting key words from the corpus based on the Jieba Chines word segmentation tool, then analyzed word frequency and built a database with Pandas. …”
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Exploring the Landscape of Intrinsic Plagiarism Detection: Benchmarks, Techniques, Evolution, and Challenges by Muhammad Faraz Manzoor, Muhammad Shoaib Farooq, Muhammad Haseeb, Uzma Farooq, Sohail Khalid, Adnan Abid

“…As the development of Large Language Models (LLMs) based content generation tools such as, ChatGPT is publicly available, the challenge of intrinsic plagiarism has become increasingly significant in various domains. …”
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A Different Shade of Green: A Survey of Indonesian Higher Education Institutional Repositories by Paul Genoni, Toong Tjiek Liauw

“…Assessment included the degrees of “openness” of repositories, the types of works collected, software used, exploration tools, existence of links to institutional website, the language used for access points, and the standard of metadata. …”
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In-Vehicle Network Inspector Utilizing Diagnostic Communications and Web Scraping for Estimating ECU Functions and CAN Topology by Masaru Matsubayashi, Takuma Koyama, Masashi Tanaka

“…Our proposed method utilizes scanning techniques on the basis of vehicular domain protocols, web scraping, and an NLP (natural language processing) technique. …”
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