A retrotransposon-derived DNA zip code internalizes myeloma cells through Clathrin-Rab5a-mediated endocytosis

IntroductionWe have demonstrated that transposons derived from ctDNA can be transferred between cancer cells. The present research aimed to investigate the cellular uptake and intracellular trafficking of Multiple Myeloma-zip code (MM-ZC), a cell-specific zip code, in myeloma cell lines. We demonstr...

Full description

Bibliographic Details
Main Authors: Pavan Kumar Puvvula, Lourdes Martinez-Medina, Munevver Cinar, Lei Feng, Andrey Pisarev, Anthony Johnson, Leon Bernal-Mizrachi
Format: Article
Language:English
Published: Frontiers Media S.A. 2024-02-01
Series:Frontiers in Oncology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fonc.2024.1288724/full
_version_ 1827344807596392448
author Pavan Kumar Puvvula
Lourdes Martinez-Medina
Munevver Cinar
Lei Feng
Andrey Pisarev
Anthony Johnson
Leon Bernal-Mizrachi
author_facet Pavan Kumar Puvvula
Lourdes Martinez-Medina
Munevver Cinar
Lei Feng
Andrey Pisarev
Anthony Johnson
Leon Bernal-Mizrachi
author_sort Pavan Kumar Puvvula
collection DOAJ
description IntroductionWe have demonstrated that transposons derived from ctDNA can be transferred between cancer cells. The present research aimed to investigate the cellular uptake and intracellular trafficking of Multiple Myeloma-zip code (MM-ZC), a cell-specific zip code, in myeloma cell lines. We demonstrated that MM-ZC uptake by myeloma cells was concentration-, time- and cell-type-dependent.MethodsFlow cytometry and confocal microscopy methods were used to identify the level of internalization of the zip codes in MM cells. To screen for the mechanism of internalization, we used multiple inhibitors of endocytosis. These experiments were followed by biotin pulldown and confocal microscopy for validation. Single interference RNA (siRNA) targeting some of the proteins involved in endocytosis was used to validate the role of this pathway in ZC cell internalization.ResultsEndocytosis inhibitors identified that Monensin and Chlorpromazine hydrochloride significantly reduced MM-ZC internalization. These findings suggested that Clathrin-mediated endocytosis and endosomal maturation play a crucial role in the cellular uptake of MM-ZC. Biotin pulldown and confocal microscopic studies revealed the involvement of proteins such as Clathrin, Rab5a, Syntaxin-6, and RCAS1 in facilitating the internalization of MM-ZC. Knockdown of Rab5a and Clathrin proteins reduced cellular uptake of MM-ZC and conclusively demonstrated the involvement of Clathrin-Rab5a pathways in MM-ZC endocytosis. Furthermore, both Rab5a and Clathrin reciprocally affected their association with MM-ZC when we depleted their proteins by siRNAs. Additionally, the loss of Rab5a decreased the Syntaxin-6 association with MMZC but not vice versa. Conversely, MM-ZC treatment enhanced the association between Clathrin and Rab5a.ConclusionOverall, the current study provides valuable insights into the cellular uptake and intracellular trafficking of MM-ZC in myeloma cells. Identifying these mechanisms and molecular players involved in MM-ZC uptake contributes to a better understanding of the delivery and potential applications of cell-specific Zip-Codes in gene delivery and drug targeting in cancer research.
first_indexed 2024-03-07T22:54:53Z
format Article
id doaj.art-01f5fb08798f4da08a8f308c3a5c52f3
institution Directory Open Access Journal
issn 2234-943X
language English
last_indexed 2024-03-07T22:54:53Z
publishDate 2024-02-01
publisher Frontiers Media S.A.
record_format Article
series Frontiers in Oncology
spelling doaj.art-01f5fb08798f4da08a8f308c3a5c52f32024-02-23T04:47:45ZengFrontiers Media S.A.Frontiers in Oncology2234-943X2024-02-011410.3389/fonc.2024.12887241288724A retrotransposon-derived DNA zip code internalizes myeloma cells through Clathrin-Rab5a-mediated endocytosisPavan Kumar Puvvula0Lourdes Martinez-Medina1Munevver Cinar2Lei Feng3Andrey Pisarev4Anthony Johnson5Leon Bernal-Mizrachi6Kodikaz Therapeutic Solutions, New York, NY, United StatesKodikaz Therapeutic Solutions, New York, NY, United StatesDepartment of Hematology and Medical Oncology, Winship Cancer Institute of Emory University, Atlanta, GA, United StatesKodikaz Therapeutic Solutions, New York, NY, United StatesKodikaz Therapeutic Solutions, New York, NY, United StatesKodikaz Therapeutic Solutions, New York, NY, United StatesDepartment of Hematology and Medical Oncology, Winship Cancer Institute of Emory University, Atlanta, GA, United StatesIntroductionWe have demonstrated that transposons derived from ctDNA can be transferred between cancer cells. The present research aimed to investigate the cellular uptake and intracellular trafficking of Multiple Myeloma-zip code (MM-ZC), a cell-specific zip code, in myeloma cell lines. We demonstrated that MM-ZC uptake by myeloma cells was concentration-, time- and cell-type-dependent.MethodsFlow cytometry and confocal microscopy methods were used to identify the level of internalization of the zip codes in MM cells. To screen for the mechanism of internalization, we used multiple inhibitors of endocytosis. These experiments were followed by biotin pulldown and confocal microscopy for validation. Single interference RNA (siRNA) targeting some of the proteins involved in endocytosis was used to validate the role of this pathway in ZC cell internalization.ResultsEndocytosis inhibitors identified that Monensin and Chlorpromazine hydrochloride significantly reduced MM-ZC internalization. These findings suggested that Clathrin-mediated endocytosis and endosomal maturation play a crucial role in the cellular uptake of MM-ZC. Biotin pulldown and confocal microscopic studies revealed the involvement of proteins such as Clathrin, Rab5a, Syntaxin-6, and RCAS1 in facilitating the internalization of MM-ZC. Knockdown of Rab5a and Clathrin proteins reduced cellular uptake of MM-ZC and conclusively demonstrated the involvement of Clathrin-Rab5a pathways in MM-ZC endocytosis. Furthermore, both Rab5a and Clathrin reciprocally affected their association with MM-ZC when we depleted their proteins by siRNAs. Additionally, the loss of Rab5a decreased the Syntaxin-6 association with MMZC but not vice versa. Conversely, MM-ZC treatment enhanced the association between Clathrin and Rab5a.ConclusionOverall, the current study provides valuable insights into the cellular uptake and intracellular trafficking of MM-ZC in myeloma cells. Identifying these mechanisms and molecular players involved in MM-ZC uptake contributes to a better understanding of the delivery and potential applications of cell-specific Zip-Codes in gene delivery and drug targeting in cancer research.https://www.frontiersin.org/articles/10.3389/fonc.2024.1288724/fullmyelomaendocytosisgene therapycancer biologynon-viral vectorscell-specific targeted delivery
spellingShingle Pavan Kumar Puvvula
Lourdes Martinez-Medina
Munevver Cinar
Lei Feng
Andrey Pisarev
Anthony Johnson
Leon Bernal-Mizrachi
A retrotransposon-derived DNA zip code internalizes myeloma cells through Clathrin-Rab5a-mediated endocytosis
Frontiers in Oncology
myeloma
endocytosis
gene therapy
cancer biology
non-viral vectors
cell-specific targeted delivery
title A retrotransposon-derived DNA zip code internalizes myeloma cells through Clathrin-Rab5a-mediated endocytosis
title_full A retrotransposon-derived DNA zip code internalizes myeloma cells through Clathrin-Rab5a-mediated endocytosis
title_fullStr A retrotransposon-derived DNA zip code internalizes myeloma cells through Clathrin-Rab5a-mediated endocytosis
title_full_unstemmed A retrotransposon-derived DNA zip code internalizes myeloma cells through Clathrin-Rab5a-mediated endocytosis
title_short A retrotransposon-derived DNA zip code internalizes myeloma cells through Clathrin-Rab5a-mediated endocytosis
title_sort retrotransposon derived dna zip code internalizes myeloma cells through clathrin rab5a mediated endocytosis
topic myeloma
endocytosis
gene therapy
cancer biology
non-viral vectors
cell-specific targeted delivery
url https://www.frontiersin.org/articles/10.3389/fonc.2024.1288724/full
work_keys_str_mv AT pavankumarpuvvula aretrotransposonderiveddnazipcodeinternalizesmyelomacellsthroughclathrinrab5amediatedendocytosis
AT lourdesmartinezmedina aretrotransposonderiveddnazipcodeinternalizesmyelomacellsthroughclathrinrab5amediatedendocytosis
AT munevvercinar aretrotransposonderiveddnazipcodeinternalizesmyelomacellsthroughclathrinrab5amediatedendocytosis
AT leifeng aretrotransposonderiveddnazipcodeinternalizesmyelomacellsthroughclathrinrab5amediatedendocytosis
AT andreypisarev aretrotransposonderiveddnazipcodeinternalizesmyelomacellsthroughclathrinrab5amediatedendocytosis
AT anthonyjohnson aretrotransposonderiveddnazipcodeinternalizesmyelomacellsthroughclathrinrab5amediatedendocytosis
AT leonbernalmizrachi aretrotransposonderiveddnazipcodeinternalizesmyelomacellsthroughclathrinrab5amediatedendocytosis
AT pavankumarpuvvula retrotransposonderiveddnazipcodeinternalizesmyelomacellsthroughclathrinrab5amediatedendocytosis
AT lourdesmartinezmedina retrotransposonderiveddnazipcodeinternalizesmyelomacellsthroughclathrinrab5amediatedendocytosis
AT munevvercinar retrotransposonderiveddnazipcodeinternalizesmyelomacellsthroughclathrinrab5amediatedendocytosis
AT leifeng retrotransposonderiveddnazipcodeinternalizesmyelomacellsthroughclathrinrab5amediatedendocytosis
AT andreypisarev retrotransposonderiveddnazipcodeinternalizesmyelomacellsthroughclathrinrab5amediatedendocytosis
AT anthonyjohnson retrotransposonderiveddnazipcodeinternalizesmyelomacellsthroughclathrinrab5amediatedendocytosis
AT leonbernalmizrachi retrotransposonderiveddnazipcodeinternalizesmyelomacellsthroughclathrinrab5amediatedendocytosis