InDelGT: An integrated pipeline for extracting indel genotypes for genetic mapping in a hybrid population using next‐generation sequencing data

InDelGT: An integrated pipeline for extracting indel genotypes for genetic mapping in a hybrid population using next‐generation sequencing data

Abstract Premise Although several software packages are available for genotyping insertion/deletion (indel) polymorphisms in genomes using next‐generation sequencing data, simultaneously calling indel genotypes across many individuals for use in genetic mapping remains challenging. Methods and Resul...

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Bibliographic Details
Main Authors: Zhiliang Pan, Jinpeng Zhang, Shengjun Bai, Zhiting Li, Chunfa Tong
Format: Article
Language:English
Published: Wiley 2022-11-01
Series:Applications in Plant Sciences
Subjects:
genetic mapping population
genotype calling
insertion/deletion polymorphism (indel)
next‐generation sequencing (NGS)
Online Access:https://doi.org/10.1002/aps3.11499

Internet

https://doi.org/10.1002/aps3.11499

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