BAD2matrix: Phylogenomic matrix concatenation, indel coding, and more

BAD2matrix: Phylogenomic matrix concatenation, indel coding, and more

Abstract Premise Common steps in phylogenomic matrix production include biological sequence concatenation, morphological data concatenation, insertion/deletion (indel) coding, gene content (presence/absence) coding, removing uninformative characters for parsimony analysis, recording with reduced ami...

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Bibliographic Details
Main Authors: Nelson R. Salinas, Gil Eshel, Gloria M. Coruzzi, Rob DeSalle, Michael Tessler, Damon P. Little
Format: Article
Language:English
Published: Wiley 2024-11-01
Series:Applications in Plant Sciences
Subjects:
concatenation
gene content
gene presence/absence
indel coding
morphology
occupancy filtering
Online Access:https://doi.org/10.1002/aps3.11604

Internet

https://doi.org/10.1002/aps3.11604

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