Extensive evaluation of ATAC-seq protocols for native or formaldehyde-fixed nuclei

Extensive evaluation of ATAC-seq protocols for native or formaldehyde-fixed nuclei

Abstract Background The “Assay for Transposase Accessible Chromatin sequencing” (ATAC-seq) is an efficient and easy to implement protocol to measure chromatin accessibility that has been widely used in multiple applications studying gene regulation. While several modifications or variants of the pro...

Full description

Bibliographic Details
Main Authors: Hao Zhang, Michael E. Rice, Joseph W. Alvin, Dominique Farrera-Gaffney, James J. Galligan, Michael D. L. Johnson, Darren A. Cusanovich
Format: Article
Language:English
Published: BMC 2022-03-01
Series:BMC Genomics
Subjects:
ATAC-seq
Chromatin accessibility
Quality control
Transcription factor
Tn5
Online Access:https://doi.org/10.1186/s12864-021-08266-x

Internet

https://doi.org/10.1186/s12864-021-08266-x

Similar Items