Viroscope: Plant viral diagnosis from high-throughput sequencing data using biologically-informed genome assembly coverage

Viroscope: Plant viral diagnosis from high-throughput sequencing data using biologically-informed genome assembly coverage

High-throughput sequencing (HTS) methods are transforming our capacity to detect pathogens and perform disease diagnosis. Although sequencing advances have enabled accessible and point-of-care HTS, data analysis pipelines have yet to provide robust tools for precise and certain diagnosis, particular...

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Bibliographic Details
Main Authors: Sandro L. Valenzuela, Tomás Norambuena, Verónica Morgante, Francisca García, Juan C. Jiménez, Carlos Núñez, Ignacia Fuentes, Bernardo Pollak
Format: Article
Language:English
Published: Frontiers Media S.A. 2022-10-01
Series:Frontiers in Microbiology
Subjects:
Viroscope
plant viral diagnostics
next-generation sequencing
genome assembly coverage
replicase identification
phytopathology
Online Access:https://www.frontiersin.org/articles/10.3389/fmicb.2022.967021/full

Internet

https://www.frontiersin.org/articles/10.3389/fmicb.2022.967021/full

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