ACPYPE update for nonuniform 1–4 scale factors: Conversion of the GLYCAM06 force field from AMBER to GROMACS

Herein we report an update to ACPYPE, a Python3 tool that now properly converts AMBER to GROMACS topologies for force fields that utilize nondefault and nonuniform 1–4 electrostatic and nonbonded scaling factors or negative dihedral force constants. Prior to this work, ACPYPE only converted AMBER to...

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Bibliographic Details
Main Authors: Austen Bernardi, Roland Faller, Dirk Reith, Karl N. Kirschner
Format: Article
Language:English
Published: Elsevier 2019-07-01
Series:SoftwareX
Online Access:http://www.sciencedirect.com/science/article/pii/S2352711018300736