Phylogenies from unaligned proteomes using sequence environments of amino acid residues

Abstract Alignment-free methods for sequence comparison and phylogeny inference have attracted a great deal of attention in recent years. Several algorithms have been implemented in diverse software packages. Despite the great number of existing methods, most of them are based on word statistics. Al...

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Bibliographic Details
Main Author: Juan Carlos Aledo
Format: Article
Language:English
Published: Nature Portfolio 2022-05-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-022-11370-x