svaRetro and svaNUMT: modular packages for annotating retrotransposed transcripts and nuclear integration of mitochondrial DNA in genome sequencing data

Nuclear integration of mitochondrial genomes and retrocopied transcript insertion are biologically important but often-overlooked aspects of structural variant (SV) annotation. While tools for their detection exist, these typically rely on reanalysis of primary data using specialised de...

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Bibliographic Details
Main Authors: Ruining Dong, Daniel Cameron, Justin Bedo, Anthony T. Papenfuss
Format: Article
Language:English
Published: GigaScience Press 2022-10-01
Series:GigaByte
Online Access:https://gigabytejournal.com/articles/70