Genetic heterogeneity of the Spy1336/R28-Spy1337 virulence axis in Streptococcus pyogenes and effect on gene transcript levels and pathogenesis.

Streptococcus pyogenes is a strict human pathogen responsible for more than 700 million infections annually worldwide. Strains of serotype M28 S. pyogenes are typically among the five more abundant types causing invasive infections and pharyngitis in adults and children. Type M28 strains also have a...

Full description

Bibliographic Details
Main Authors: Jesus M Eraso, Priyanka Kachroo, Randall J Olsen, Stephen B Beres, Luchang Zhu, Traci Badu, Sydney Shannon, Concepcion C Cantu, Matthew Ojeda Saavedra, Samantha L Kubiak, Adeline R Porter, Frank R DeLeo, James M Musser
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2020-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0229064
_version_ 1818586717414752256
author Jesus M Eraso
Priyanka Kachroo
Randall J Olsen
Stephen B Beres
Luchang Zhu
Traci Badu
Sydney Shannon
Concepcion C Cantu
Matthew Ojeda Saavedra
Samantha L Kubiak
Adeline R Porter
Frank R DeLeo
James M Musser
author_facet Jesus M Eraso
Priyanka Kachroo
Randall J Olsen
Stephen B Beres
Luchang Zhu
Traci Badu
Sydney Shannon
Concepcion C Cantu
Matthew Ojeda Saavedra
Samantha L Kubiak
Adeline R Porter
Frank R DeLeo
James M Musser
author_sort Jesus M Eraso
collection DOAJ
description Streptococcus pyogenes is a strict human pathogen responsible for more than 700 million infections annually worldwide. Strains of serotype M28 S. pyogenes are typically among the five more abundant types causing invasive infections and pharyngitis in adults and children. Type M28 strains also have an unusual propensity to cause puerperal sepsis and neonatal disease. We recently discovered that a one-nucleotide indel in an intergenic homopolymeric tract located between genes Spy1336/R28 and Spy1337 altered virulence in a mouse model of infection. In the present study, we analyzed size variation in this homopolymeric tract and determined the extent of heterogeneity in the number of tandemly-repeated 79-amino acid domains in the coding region of Spy1336/R28 in large samples of strains recovered from humans with invasive infections. Both repeat sequence elements are highly polymorphic in natural populations of M28 strains. Variation in the homopolymeric tract results in (i) changes in transcript levels of Spy1336/R28 and Spy1337 in vitro, (ii) differences in virulence in a mouse model of necrotizing myositis, and (iii) global transcriptome changes as shown by RNAseq analysis of isogenic mutant strains. Variation in the number of tandem repeats in the coding sequence of Spy1336/R28 is responsible for size variation of R28 protein in natural populations. Isogenic mutant strains in which genes encoding R28 or transcriptional regulator Spy1337 are inactivated are significantly less virulent in a nonhuman primate model of necrotizing myositis. Our findings provide impetus for additional studies addressing the role of R28 and Spy1337 variation in pathogen-host interactions.
first_indexed 2024-12-16T08:57:24Z
format Article
id doaj.art-0b9f20ab49cd46bfb9afa9d9f90b1c26
institution Directory Open Access Journal
issn 1932-6203
language English
last_indexed 2024-12-16T08:57:24Z
publishDate 2020-01-01
publisher Public Library of Science (PLoS)
record_format Article
series PLoS ONE
spelling doaj.art-0b9f20ab49cd46bfb9afa9d9f90b1c262022-12-21T22:37:15ZengPublic Library of Science (PLoS)PLoS ONE1932-62032020-01-01153e022906410.1371/journal.pone.0229064Genetic heterogeneity of the Spy1336/R28-Spy1337 virulence axis in Streptococcus pyogenes and effect on gene transcript levels and pathogenesis.Jesus M ErasoPriyanka KachrooRandall J OlsenStephen B BeresLuchang ZhuTraci BaduSydney ShannonConcepcion C CantuMatthew Ojeda SaavedraSamantha L KubiakAdeline R PorterFrank R DeLeoJames M MusserStreptococcus pyogenes is a strict human pathogen responsible for more than 700 million infections annually worldwide. Strains of serotype M28 S. pyogenes are typically among the five more abundant types causing invasive infections and pharyngitis in adults and children. Type M28 strains also have an unusual propensity to cause puerperal sepsis and neonatal disease. We recently discovered that a one-nucleotide indel in an intergenic homopolymeric tract located between genes Spy1336/R28 and Spy1337 altered virulence in a mouse model of infection. In the present study, we analyzed size variation in this homopolymeric tract and determined the extent of heterogeneity in the number of tandemly-repeated 79-amino acid domains in the coding region of Spy1336/R28 in large samples of strains recovered from humans with invasive infections. Both repeat sequence elements are highly polymorphic in natural populations of M28 strains. Variation in the homopolymeric tract results in (i) changes in transcript levels of Spy1336/R28 and Spy1337 in vitro, (ii) differences in virulence in a mouse model of necrotizing myositis, and (iii) global transcriptome changes as shown by RNAseq analysis of isogenic mutant strains. Variation in the number of tandem repeats in the coding sequence of Spy1336/R28 is responsible for size variation of R28 protein in natural populations. Isogenic mutant strains in which genes encoding R28 or transcriptional regulator Spy1337 are inactivated are significantly less virulent in a nonhuman primate model of necrotizing myositis. Our findings provide impetus for additional studies addressing the role of R28 and Spy1337 variation in pathogen-host interactions.https://doi.org/10.1371/journal.pone.0229064
spellingShingle Jesus M Eraso
Priyanka Kachroo
Randall J Olsen
Stephen B Beres
Luchang Zhu
Traci Badu
Sydney Shannon
Concepcion C Cantu
Matthew Ojeda Saavedra
Samantha L Kubiak
Adeline R Porter
Frank R DeLeo
James M Musser
Genetic heterogeneity of the Spy1336/R28-Spy1337 virulence axis in Streptococcus pyogenes and effect on gene transcript levels and pathogenesis.
PLoS ONE
title Genetic heterogeneity of the Spy1336/R28-Spy1337 virulence axis in Streptococcus pyogenes and effect on gene transcript levels and pathogenesis.
title_full Genetic heterogeneity of the Spy1336/R28-Spy1337 virulence axis in Streptococcus pyogenes and effect on gene transcript levels and pathogenesis.
title_fullStr Genetic heterogeneity of the Spy1336/R28-Spy1337 virulence axis in Streptococcus pyogenes and effect on gene transcript levels and pathogenesis.
title_full_unstemmed Genetic heterogeneity of the Spy1336/R28-Spy1337 virulence axis in Streptococcus pyogenes and effect on gene transcript levels and pathogenesis.
title_short Genetic heterogeneity of the Spy1336/R28-Spy1337 virulence axis in Streptococcus pyogenes and effect on gene transcript levels and pathogenesis.
title_sort genetic heterogeneity of the spy1336 r28 spy1337 virulence axis in streptococcus pyogenes and effect on gene transcript levels and pathogenesis
url https://doi.org/10.1371/journal.pone.0229064
work_keys_str_mv AT jesusmeraso geneticheterogeneityofthespy1336r28spy1337virulenceaxisinstreptococcuspyogenesandeffectongenetranscriptlevelsandpathogenesis
AT priyankakachroo geneticheterogeneityofthespy1336r28spy1337virulenceaxisinstreptococcuspyogenesandeffectongenetranscriptlevelsandpathogenesis
AT randalljolsen geneticheterogeneityofthespy1336r28spy1337virulenceaxisinstreptococcuspyogenesandeffectongenetranscriptlevelsandpathogenesis
AT stephenbberes geneticheterogeneityofthespy1336r28spy1337virulenceaxisinstreptococcuspyogenesandeffectongenetranscriptlevelsandpathogenesis
AT luchangzhu geneticheterogeneityofthespy1336r28spy1337virulenceaxisinstreptococcuspyogenesandeffectongenetranscriptlevelsandpathogenesis
AT tracibadu geneticheterogeneityofthespy1336r28spy1337virulenceaxisinstreptococcuspyogenesandeffectongenetranscriptlevelsandpathogenesis
AT sydneyshannon geneticheterogeneityofthespy1336r28spy1337virulenceaxisinstreptococcuspyogenesandeffectongenetranscriptlevelsandpathogenesis
AT concepcionccantu geneticheterogeneityofthespy1336r28spy1337virulenceaxisinstreptococcuspyogenesandeffectongenetranscriptlevelsandpathogenesis
AT matthewojedasaavedra geneticheterogeneityofthespy1336r28spy1337virulenceaxisinstreptococcuspyogenesandeffectongenetranscriptlevelsandpathogenesis
AT samanthalkubiak geneticheterogeneityofthespy1336r28spy1337virulenceaxisinstreptococcuspyogenesandeffectongenetranscriptlevelsandpathogenesis
AT adelinerporter geneticheterogeneityofthespy1336r28spy1337virulenceaxisinstreptococcuspyogenesandeffectongenetranscriptlevelsandpathogenesis
AT frankrdeleo geneticheterogeneityofthespy1336r28spy1337virulenceaxisinstreptococcuspyogenesandeffectongenetranscriptlevelsandpathogenesis
AT jamesmmusser geneticheterogeneityofthespy1336r28spy1337virulenceaxisinstreptococcuspyogenesandeffectongenetranscriptlevelsandpathogenesis