Nanopore sequencing for identification and characterization of antimicrobial-resistant Escherichia coli and Salmonella spp. from tilapia and shrimp sold at wet markets in Dhaka, Bangladesh

Nanopore sequencing for identification and characterization of antimicrobial-resistant Escherichia coli and Salmonella spp. from tilapia and shrimp sold at wet markets in Dhaka, Bangladesh

Wet markets in low-and middle-income countries are often reported to have inadequate sanitation resulting in fecal contamination of sold produce. Consumption of contaminated wet market-sourced foods has been linked to individual illness and disease outbreaks. This pilot study, conducted in two major...

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Bibliographic Details
Main Authors: Shafiq Rheman, Sabrina Hossain, Md Samun Sarker, Farhana Akter, Laura Khor, Han Ming Gan, Andy Powell, Roderick M. Card, Yaovi Mahuton Gildas Hounmanou, Anders Dalsgaard, Chadag Vishnumurthy Mohan, Zamila Bueaza Bupasha, Mohammed A. Samad, David W. Verner-Jeffreys, Jérôme Delamare-Deboutteville
Format: Article
Language:English
Published: Frontiers Media S.A. 2024-03-01
Series:Frontiers in Microbiology
Subjects:
Salmonella
Escherichia coli
tilapia
shrimp
antimicrobial resistance
whole genome sequencing
Online Access:https://www.frontiersin.org/articles/10.3389/fmicb.2024.1329620/full

Internet

https://www.frontiersin.org/articles/10.3389/fmicb.2024.1329620/full

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