Molecular Dynamics Simulation of High Density DNA Arrays

Molecular Dynamics Simulation of High Density DNA Arrays

Densely packed DNA arrays exhibit hexagonal and orthorhombic local packings, as well as a weakly first order transition between them. While we have some understanding of the interactions between DNA molecules in aqueous ionic solutions, the structural details of its ordered phases and the mechanism...

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Bibliographic Details
Main Authors: Rudolf Podgornik, Julija Zavadlav, Matej Praprotnik
Format: Article
Language:English
Published: MDPI AG 2018-01-01
Series:Computation
Subjects:
multiscale modeling and simulation
molecular dynamics
adaptive resolution
osmotic isobaric ensemble
dielectric properties
orientational order parameters
densely packed DNA arrays
Online Access:http://www.mdpi.com/2079-3197/6/1/3

Internet

http://www.mdpi.com/2079-3197/6/1/3

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