Protocol for Molecular Dynamics Simulations of Proteins

Molecular dynamics (MD) simulations have become one of the most important tools in understanding the behavior of bio-molecules on nanosecond to microsecond time scales. In this protocol, we provide a general approach and standard setup protocol for MD simulations by using the Gromacs MD suite.

Bibliographic Details
Main Authors: MNV Prasad Gajula, Anuj Kumar, Johny Ijaq
Format: Article
Language:English
Published: Bio-protocol LLC 2016-12-01
Series:Bio-Protocol
Online Access:https://bio-protocol.org/en/bpdetail?id=2051&type=0