Spatial registration of serial microscopic brain images to three-dimensional reference atlases with the QuickNII tool.

Modern high throughput brain wide profiling techniques for cells and their morphology, connectivity, and other properties, make the use of reference atlases with 3D coordinate frameworks essential. However, anatomical location of observations made in microscopic sectional images from rodent brains i...

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Bibliographic Details
Main Authors: Maja A Puchades, Gergely Csucs, Debora Ledergerber, Trygve B Leergaard, Jan G Bjaalie
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2019-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0216796