Multiple comparative metagenomics using multiset k-mer counting

Background Large scale metagenomic projects aim to extract biodiversity knowledge between different environmental conditions. Current methods for comparing microbial communities face important limitations. Those based on taxonomical or functional assignation rely on a small subset of the sequences t...

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Bibliographic Details
Main Authors: Gaëtan Benoit, Pierre Peterlongo, Mahendra Mariadassou, Erwan Drezen, Sophie Schbath, Dominique Lavenier, Claire Lemaitre
Format: Article
Language:English
Published: PeerJ Inc. 2016-11-01
Series:PeerJ Computer Science
Subjects:
Online Access:https://peerj.com/articles/cs-94.pdf