Reference-based read clustering improves the de novo genome assembly of microbial strains

Constructing accurate microbial genome assemblies is necessary to understand genetic diversity in microbial genomes and its functional consequences. However, it still remains as a challenging task especially when only short-read sequencing technologies are used. Here, we present a new read-clusterin...

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Bibliographic Details
Main Authors: Mikang Sim, Jongin Lee, Daehong Kwon, Daehwan Lee, Nayoung Park, Suyeon Wy, Younhee Ko, Jaebum Kim
Format: Article
Language:English
Published: Elsevier 2023-01-01
Series:Computational and Structural Biotechnology Journal
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2001037022005876