Optimized detection of homologous recombination deficiency improves the prediction of clinical outcomes in cancer
Abstract Homologous recombination DNA-repair deficiency (HRD) is a common driver of genomic instability and confers a therapeutic vulnerability in cancer. The accurate detection of somatic allelic imbalances (AIs) has been limited by methods focused on BRCA1/2 mutations and using mixtures of cancer...
Main Authors: | Fernando Perez-Villatoro, Jaana Oikkonen, Julia Casado, Anastasiya Chernenko, Doga C. Gulhan, Manuela Tumiati, Yilin Li, Kari Lavikka, Sakari Hietanen, Johanna Hynninen, Ulla-Maija Haltia, Jaakko S. Tyrmi, Hannele Laivuori, Panagiotis A. Konstantinopoulos, Sampsa Hautaniemi, Liisa Kauppi, Anniina Färkkilä |
---|---|
Format: | Article |
Language: | English |
Published: |
Nature Portfolio
2022-12-01
|
Series: | npj Precision Oncology |
Online Access: | https://doi.org/10.1038/s41698-022-00339-8 |
Similar Items
-
Circulating tumor DNA-based copy-number profiles enable monitoring treatment effects during therapy in high-grade serous carcinoma
by: Mai T.N. Nguyen, et al.
Published: (2023-12-01) -
Genome-wide quantification of copy-number aberration impact on gene expression in ovarian high-grade serous carcinoma
by: Sanaz Jamalzadeh, et al.
Published: (2024-02-01) -
Extensive mutational ctDNA profiles reflect High-grade serous cancer tumors and reveal emerging mutations at recurrence
by: Giovanni Marchi, et al.
Published: (2024-01-01) -
Quantification of cell death and proliferation of patient-derived ovarian cancer organoids through 3D imaging and image analysis
by: Aikaterini Skorda, et al.
Published: (2023-12-01) -
H&E image analysis pipeline for quantifying morphological features
by: Valeria Ariotta, et al.
Published: (2023-01-01)