Modular co-culture engineering of Yarrowia lipolytica for amorphadiene biosynthesis

Abstract Amorphadiene is the precursor to synthesize the antimalarial drug artemisinin. The production of amorphadiene and artemisinin from metabolically engineered microbes may provide an alternate to plant secondary metabolite extraction. Microbial consortia can offer division of labor, and microb...

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Main Authors: Monireh Marsafari, Fidelis Azi, Shaohua Dou, Peng Xu
Format: Article
Language:English
Published: BMC 2022-12-01
Series:Microbial Cell Factories
Subjects:
Online Access:https://doi.org/10.1186/s12934-022-02010-0
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author Monireh Marsafari
Fidelis Azi
Shaohua Dou
Peng Xu
author_facet Monireh Marsafari
Fidelis Azi
Shaohua Dou
Peng Xu
author_sort Monireh Marsafari
collection DOAJ
description Abstract Amorphadiene is the precursor to synthesize the antimalarial drug artemisinin. The production of amorphadiene and artemisinin from metabolically engineered microbes may provide an alternate to plant secondary metabolite extraction. Microbial consortia can offer division of labor, and microbial co-culture system can be leveraged to achieve cost-efficient production of natural products. Using a co-culture system of Y. lipolytica Po1f and Po1g strains, subcellular localization of ADS gene (encoding amorphadiene synthase) into the endoplasmic reticulum, co-utilization of mixed carbon source, and enlargement of the endoplasmic reticulum (ER) surface area, we were able to significantly improve amorphadiene production in this work. Using Po1g/PPtM and Po1f/AaADSERx3/iGFMPDU strains and co-utilization of 5 µM sodium acetate with 20 g/L glucose in YPD media, amorphadiene titer were increased to 65.094 mg/L. The enlargement of the ER surface area caused by the deletion of the PAH1 gene provided more subcellular ER space for the action of the ADS-tagged gene. It further increased the amorphadiene production to 71.74 mg/L. The results demonstrated that the importance of the spatial localization of critical enzymes, and manipulating metabolic flux in the co-culture of Y. lipolytica can be efficient over a single culture for the bioproduction of isoprenoid-related secondary metabolites in a modular manner. Graphical Abstract
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spelling doaj.art-15baa7fbe8434f4ba5f90e3ef443b0352023-01-01T12:30:40ZengBMCMicrobial Cell Factories1475-28592022-12-0121111010.1186/s12934-022-02010-0Modular co-culture engineering of Yarrowia lipolytica for amorphadiene biosynthesisMonireh Marsafari0Fidelis Azi1Shaohua Dou2Peng Xu3Department of Chemical, Biochemical and Environmental Engineering, University of Maryland Baltimore CountyDepartment of Chemical Engineering, Guangdong Provincial Key Laboratory of Materials and Technologies for Energy Conversion (MATEC), Guangdong Technion – Israel Institute of TechnologyCollege of Life and Health, Dalian UniversityDepartment of Chemical, Biochemical and Environmental Engineering, University of Maryland Baltimore CountyAbstract Amorphadiene is the precursor to synthesize the antimalarial drug artemisinin. The production of amorphadiene and artemisinin from metabolically engineered microbes may provide an alternate to plant secondary metabolite extraction. Microbial consortia can offer division of labor, and microbial co-culture system can be leveraged to achieve cost-efficient production of natural products. Using a co-culture system of Y. lipolytica Po1f and Po1g strains, subcellular localization of ADS gene (encoding amorphadiene synthase) into the endoplasmic reticulum, co-utilization of mixed carbon source, and enlargement of the endoplasmic reticulum (ER) surface area, we were able to significantly improve amorphadiene production in this work. Using Po1g/PPtM and Po1f/AaADSERx3/iGFMPDU strains and co-utilization of 5 µM sodium acetate with 20 g/L glucose in YPD media, amorphadiene titer were increased to 65.094 mg/L. The enlargement of the ER surface area caused by the deletion of the PAH1 gene provided more subcellular ER space for the action of the ADS-tagged gene. It further increased the amorphadiene production to 71.74 mg/L. The results demonstrated that the importance of the spatial localization of critical enzymes, and manipulating metabolic flux in the co-culture of Y. lipolytica can be efficient over a single culture for the bioproduction of isoprenoid-related secondary metabolites in a modular manner. Graphical Abstracthttps://doi.org/10.1186/s12934-022-02010-0Y. lipolyticaCo-cultureAmorphadieneEndoplasmic reticulumCellular localization
spellingShingle Monireh Marsafari
Fidelis Azi
Shaohua Dou
Peng Xu
Modular co-culture engineering of Yarrowia lipolytica for amorphadiene biosynthesis
Microbial Cell Factories
Y. lipolytica
Co-culture
Amorphadiene
Endoplasmic reticulum
Cellular localization
title Modular co-culture engineering of Yarrowia lipolytica for amorphadiene biosynthesis
title_full Modular co-culture engineering of Yarrowia lipolytica for amorphadiene biosynthesis
title_fullStr Modular co-culture engineering of Yarrowia lipolytica for amorphadiene biosynthesis
title_full_unstemmed Modular co-culture engineering of Yarrowia lipolytica for amorphadiene biosynthesis
title_short Modular co-culture engineering of Yarrowia lipolytica for amorphadiene biosynthesis
title_sort modular co culture engineering of yarrowia lipolytica for amorphadiene biosynthesis
topic Y. lipolytica
Co-culture
Amorphadiene
Endoplasmic reticulum
Cellular localization
url https://doi.org/10.1186/s12934-022-02010-0
work_keys_str_mv AT monirehmarsafari modularcocultureengineeringofyarrowialipolyticaforamorphadienebiosynthesis
AT fidelisazi modularcocultureengineeringofyarrowialipolyticaforamorphadienebiosynthesis
AT shaohuadou modularcocultureengineeringofyarrowialipolyticaforamorphadienebiosynthesis
AT pengxu modularcocultureengineeringofyarrowialipolyticaforamorphadienebiosynthesis