An Overview of Key Factors Affecting Genomic Selection for Wheat Quality Traits

Selection for wheat (<i>Triticum aestivum</i> L.) grain quality is often costly and time-consuming since it requires extensive phenotyping in the last phases of development of new lines and cultivars. The development of high-throughput genotyping in the last decade enabled reliable and r...

Full description

Bibliographic Details
Main Authors: Ivana Plavšin, Jerko Gunjača, Zlatko Šatović, Hrvoje Šarčević, Marko Ivić, Krešimir Dvojković, Dario Novoselović
Format: Article
Language:English
Published: MDPI AG 2021-04-01
Series:Plants
Subjects:
Online Access:https://www.mdpi.com/2223-7747/10/4/745
_version_ 1797538038687989760
author Ivana Plavšin
Jerko Gunjača
Zlatko Šatović
Hrvoje Šarčević
Marko Ivić
Krešimir Dvojković
Dario Novoselović
author_facet Ivana Plavšin
Jerko Gunjača
Zlatko Šatović
Hrvoje Šarčević
Marko Ivić
Krešimir Dvojković
Dario Novoselović
author_sort Ivana Plavšin
collection DOAJ
description Selection for wheat (<i>Triticum aestivum</i> L.) grain quality is often costly and time-consuming since it requires extensive phenotyping in the last phases of development of new lines and cultivars. The development of high-throughput genotyping in the last decade enabled reliable and rapid predictions of breeding values based only on marker information. Genomic selection (GS) is a method that enables the prediction of breeding values of individuals by simultaneously incorporating all available marker information into a model. The success of GS depends on the obtained prediction accuracy, which is influenced by various molecular, genetic, and phenotypic factors, as well as the factors of the selected statistical model. The objectives of this article are to review research on GS for wheat quality done so far and to highlight the key factors affecting prediction accuracy, in order to suggest the most applicable approach in GS for wheat quality traits.
first_indexed 2024-03-10T12:25:46Z
format Article
id doaj.art-160f2dc4630146a2beda33fdb9d2b3c4
institution Directory Open Access Journal
issn 2223-7747
language English
last_indexed 2024-03-10T12:25:46Z
publishDate 2021-04-01
publisher MDPI AG
record_format Article
series Plants
spelling doaj.art-160f2dc4630146a2beda33fdb9d2b3c42023-11-21T15:03:49ZengMDPI AGPlants2223-77472021-04-0110474510.3390/plants10040745An Overview of Key Factors Affecting Genomic Selection for Wheat Quality TraitsIvana Plavšin0Jerko Gunjača1Zlatko Šatović2Hrvoje Šarčević3Marko Ivić4Krešimir Dvojković5Dario Novoselović6Department for Cereal Breeding and Genetics, Agricultural Institute Osijek, Južno predgrađe 17, 31000 Osijek, CroatiaCentre of Excellence for Biodiversity and Molecular Plant Breeding (CoE CroP-BioDiv), Svetošimunska cesta 25, 10000 Zagreb, CroatiaCentre of Excellence for Biodiversity and Molecular Plant Breeding (CoE CroP-BioDiv), Svetošimunska cesta 25, 10000 Zagreb, CroatiaCentre of Excellence for Biodiversity and Molecular Plant Breeding (CoE CroP-BioDiv), Svetošimunska cesta 25, 10000 Zagreb, CroatiaDepartment for Cereal Breeding and Genetics, Agricultural Institute Osijek, Južno predgrađe 17, 31000 Osijek, CroatiaDepartment for Cereal Breeding and Genetics, Agricultural Institute Osijek, Južno predgrađe 17, 31000 Osijek, CroatiaDepartment for Cereal Breeding and Genetics, Agricultural Institute Osijek, Južno predgrađe 17, 31000 Osijek, CroatiaSelection for wheat (<i>Triticum aestivum</i> L.) grain quality is often costly and time-consuming since it requires extensive phenotyping in the last phases of development of new lines and cultivars. The development of high-throughput genotyping in the last decade enabled reliable and rapid predictions of breeding values based only on marker information. Genomic selection (GS) is a method that enables the prediction of breeding values of individuals by simultaneously incorporating all available marker information into a model. The success of GS depends on the obtained prediction accuracy, which is influenced by various molecular, genetic, and phenotypic factors, as well as the factors of the selected statistical model. The objectives of this article are to review research on GS for wheat quality done so far and to highlight the key factors affecting prediction accuracy, in order to suggest the most applicable approach in GS for wheat quality traits.https://www.mdpi.com/2223-7747/10/4/745wheat qualitygenomic selectionGEBVprediction accuracytraining populationvalidation population
spellingShingle Ivana Plavšin
Jerko Gunjača
Zlatko Šatović
Hrvoje Šarčević
Marko Ivić
Krešimir Dvojković
Dario Novoselović
An Overview of Key Factors Affecting Genomic Selection for Wheat Quality Traits
Plants
wheat quality
genomic selection
GEBV
prediction accuracy
training population
validation population
title An Overview of Key Factors Affecting Genomic Selection for Wheat Quality Traits
title_full An Overview of Key Factors Affecting Genomic Selection for Wheat Quality Traits
title_fullStr An Overview of Key Factors Affecting Genomic Selection for Wheat Quality Traits
title_full_unstemmed An Overview of Key Factors Affecting Genomic Selection for Wheat Quality Traits
title_short An Overview of Key Factors Affecting Genomic Selection for Wheat Quality Traits
title_sort overview of key factors affecting genomic selection for wheat quality traits
topic wheat quality
genomic selection
GEBV
prediction accuracy
training population
validation population
url https://www.mdpi.com/2223-7747/10/4/745
work_keys_str_mv AT ivanaplavsin anoverviewofkeyfactorsaffectinggenomicselectionforwheatqualitytraits
AT jerkogunjaca anoverviewofkeyfactorsaffectinggenomicselectionforwheatqualitytraits
AT zlatkosatovic anoverviewofkeyfactorsaffectinggenomicselectionforwheatqualitytraits
AT hrvojesarcevic anoverviewofkeyfactorsaffectinggenomicselectionforwheatqualitytraits
AT markoivic anoverviewofkeyfactorsaffectinggenomicselectionforwheatqualitytraits
AT kresimirdvojkovic anoverviewofkeyfactorsaffectinggenomicselectionforwheatqualitytraits
AT darionovoselovic anoverviewofkeyfactorsaffectinggenomicselectionforwheatqualitytraits
AT ivanaplavsin overviewofkeyfactorsaffectinggenomicselectionforwheatqualitytraits
AT jerkogunjaca overviewofkeyfactorsaffectinggenomicselectionforwheatqualitytraits
AT zlatkosatovic overviewofkeyfactorsaffectinggenomicselectionforwheatqualitytraits
AT hrvojesarcevic overviewofkeyfactorsaffectinggenomicselectionforwheatqualitytraits
AT markoivic overviewofkeyfactorsaffectinggenomicselectionforwheatqualitytraits
AT kresimirdvojkovic overviewofkeyfactorsaffectinggenomicselectionforwheatqualitytraits
AT darionovoselovic overviewofkeyfactorsaffectinggenomicselectionforwheatqualitytraits