Scelestial: Fast and accurate single-cell lineage tree inference based on a Steiner tree approximation algorithm.

Single-cell genome sequencing provides a highly granular view of biological systems but is affected by high error rates, allelic amplification bias, and uneven genome coverage. This creates a need for data-specific computational methods, for purposes such as for cell lineage tree inference. The obje...

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Bibliographic Details
Main Authors: Mohammad-Hadi Foroughmand-Araabi, Sama Goliaei, Alice C McHardy
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2022-08-01
Series:PLoS Computational Biology
Online Access:https://doi.org/10.1371/journal.pcbi.1009100