ezTree: an automated pipeline for identifying phylogenetic marker genes and inferring evolutionary relationships among uncultivated prokaryotic draft genomes

ezTree: an automated pipeline for identifying phylogenetic marker genes and inferring evolutionary relationships among uncultivated prokaryotic draft genomes

Abstract Background Inferring phylogenetic trees for newly recovered genomes from metagenomic samples is very useful in determining the identities of uncultivated microorganisms. Even though 16S ribosomal RNA small subunit genes have been established as “gold standard” markers for inferring phylogen...

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Bibliographic Details
Main Author: Yu-Wei Wu
Format: Article
Language:English
Published: BMC 2018-01-01
Series:BMC Genomics
Subjects:
Marker gene
Phylogenetic tree
Uncultivated species
Online Access:http://link.springer.com/article/10.1186/s12864-017-4327-9

Internet

http://link.springer.com/article/10.1186/s12864-017-4327-9

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