Untangling an AGS Outbreak Caused by the Recombinant GII.12[P16] Norovirus With Nanopore Sequencing

Untangling an AGS Outbreak Caused by the Recombinant GII.12[P16] Norovirus With Nanopore Sequencing

For a rapidly spreading virus such as NoV (norovirus), pathogen identification, genotype classification, and transmission tracing are urgent for epidemic control. Here, we applied the Nanopore metatranscriptomic sequencing to determine the causative pathogen of a community AGS (Acute gastroenteritis...

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Bibliographic Details
Main Authors: Qianling Xiong, Huimin Jiang, Zhe Liu, Jinju Peng, Jing Sun, Ling Fang, Caixia Li, Ming Qiu, Xin Zhang, Jing Lu
Format: Article
Language:English
Published: Frontiers Media S.A. 2022-07-01
Series:Frontiers in Cellular and Infection Microbiology
Subjects:
norovirus
nanopore
metatranscriptomic sequencing
GII.12[P16]
phylogenetic
recombination
Online Access:https://www.frontiersin.org/articles/10.3389/fcimb.2022.911563/full

Internet

https://www.frontiersin.org/articles/10.3389/fcimb.2022.911563/full

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