A pipeline for assembling low copy nuclear markers from plant genome skimming data for phylogenetic use

Background Genome skimming is a popular method in plant phylogenomics that do not include a biased enrichment step, relying on random shallow sequencing of total genomic DNA. From these data the plastome is usually readily assembled and constitutes the bulk of phylogenetic information generated in t...

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Bibliographic Details
Main Author: Marcelo Reginato
Format: Article
Language:English
Published: PeerJ Inc. 2022-12-01
Series:PeerJ
Subjects:
Online Access:https://peerj.com/articles/14525.pdf