Improved Large-Scale Homology Search by Two-Step Seed Search Using Multiple Reduced Amino Acid Alphabets

Improved Large-Scale Homology Search by Two-Step Seed Search Using Multiple Reduced Amino Acid Alphabets

Metagenomic analysis, a technique used to comprehensively analyze microorganisms present in the environment, requires performing high-precision homology searches on large amounts of sequencing data, the size of which has increased dramatically with the development of next-generation sequencing. NCBI...

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Bibliographic Details
Main Authors: Kazuki Takabatake, Kazuki Izawa, Motohiro Akikawa, Keisuke Yanagisawa, Masahito Ohue, Yutaka Akiyama
Format: Article
Language:English
Published: MDPI AG 2021-09-01
Series:Genes
Subjects:
homology search
genome sequence
metagenomic analysis
reduced amino acid
Online Access:https://www.mdpi.com/2073-4425/12/9/1455

Internet

https://www.mdpi.com/2073-4425/12/9/1455

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