Genome assembly composition of the String “ACGT” array: a review of data structure accuracy and performance challenges

Background The development of sequencing technology increases the number of genomes being sequenced. However, obtaining a quality genome sequence remains a challenge in genome assembly by assembling a massive number of short strings (reads) with the presence of repetitive sequences (repeats). Comput...

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Bibliographic Details
Main Authors: Sherif Magdy Mohamed Abdelaziz Barakat, Roselina Sallehuddin, Siti Sophiayati Yuhaniz, Raja Farhana R. Khairuddin, Yasir Mahmood
Format: Article
Language:English
Published: PeerJ Inc. 2023-07-01
Series:PeerJ Computer Science
Subjects:
Online Access:https://peerj.com/articles/cs-1180.pdf