Learnt representations of proteins can be used for accurate prediction of small molecule binding sites on experimentally determined and predicted protein structures

Abstract Protein-ligand binding site prediction is a useful tool for understanding the functional behaviour and potential drug-target interactions of a novel protein of interest. However, most binding site prediction methods are tested by providing crystallised ligand-bound (holo) structures as inpu...

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Bibliographic Details
Main Authors: Anna Carbery, Martin Buttenschoen, Rachael Skyner, Frank von Delft, Charlotte M. Deane
Format: Article
Language:English
Published: BMC 2024-03-01
Series:Journal of Cheminformatics
Online Access:https://doi.org/10.1186/s13321-024-00821-4