ClusTrast: a short read de novo transcript isoform assembler guided by clustered contigs

Abstract Background Transcriptome assembly from RNA-sequencing data in species without a reliable reference genome has to be performed de novo, but studies have shown that de novo methods often have inadequate ability to reconstruct transcript isoforms. We address this issue by constructing an assem...

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Váldodahkkit: Karl Johan Westrin, Warren W. Kretzschmar, Olof Emanuelsson
Materiálatiipa: Artihkal
Giella:English
Almmustuhtton: BMC 2024-02-01
Ráidu:BMC Bioinformatics
Fáttát:
Liŋkkat:https://doi.org/10.1186/s12859-024-05663-3