Challenges of Comparing Marine Microbiome Community Composition Data Provided by Different Commercial Laboratories and Classification Databases
In the high-throughput sequencing (HTS) era, a metabarcoding technique based on the bacterial V3–V4 hypervariable region of 16S rRNA analysis requires sophisticated bioinformatics pipelines and validated methods that allow researchers to compare their data with confidence. Many commercial laboratori...
Main Authors: | Monika Mioduchowska, Anna Iglikowska, Jan P. Jastrzębski, Anna-Karina Kaczorowska, Ewa Kotlarska, Artur Trzebny, Agata Weydmann-Zwolicka |
---|---|
Format: | Article |
Language: | English |
Published: |
MDPI AG
2022-11-01
|
Series: | Water |
Subjects: | |
Online Access: | https://www.mdpi.com/2073-4441/14/23/3855 |
Similar Items
-
Contrasting Marine Microbial Communities of the Fram Strait with the First Confirmed Record of Cyanobacteria <i>Prochlorococcus marinus</i> in the Arctic Region
by: Monika Mioduchowska, et al.
Published: (2023-09-01) -
Uncovering Effects from the Structure of Metabarcode Sequences for Metagenetic and Microbiome Analysis
by: David C. Molik, et al.
Published: (2020-03-01) -
The Microbiome of Neotropical Water Striders and Its Potential Role in Codiversification
by: Anakena M. Castillo, et al.
Published: (2020-08-01) -
The Effects of Temperature on Animal Gut Microbiomes
by: Juan Sepulveda, et al.
Published: (2020-03-01) -
Metataxonomic Analysis of Grape Microbiota During Wine Fermentation Reveals the Distinction of Cyprus Regional terroirs
by: Eleni Kamilari, et al.
Published: (2021-09-01)