The pan-genome of Mycobacterium avium subsp. paratuberculosis (Map) confirms ancestral lineage and reveals gene rearrangements within Map Type S

The pan-genome of Mycobacterium avium subsp. paratuberculosis (Map) confirms ancestral lineage and reveals gene rearrangements within Map Type S

Abstract Background To date genomic studies on Map have concentrated on Type C strains with only a few Type S strains included for comparison. In this study the entire pan-genome of 261 Map genomes (205 Type C, 52 Type S and 4 Type B) and 7 Mycobacterium avium complex (Mac) genomes were analysed to...

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Bibliographic Details
Main Authors: Rachel Hodgeman, Rachel Mann, Noel Djitro, Keith Savin, Simone Rochfort, Brendan Rodoni
Format: Article
Language:English
Published: BMC 2023-10-01
Series:BMC Genomics
Subjects:
Mycobacterium avium subsp. paratuberculosis
Pan-genome
CAZymes
Prophages
Secondary metabolites
PpanGGolin
Online Access:https://doi.org/10.1186/s12864-023-09752-0

Internet

https://doi.org/10.1186/s12864-023-09752-0

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