Transcriptome sequencing, de novo assembly, characterisation of wild accession of blackgram (Vigna mungo var. silvestris) as a rich resource for development of molecular markers and validation of SNPs by high resolution melting (HRM) analysis

Transcriptome sequencing, de novo assembly, characterisation of wild accession of blackgram (Vigna mungo var. silvestris) as a rich resource for development of molecular markers and validation of SNPs by high resolution melting (HRM) analysis

Abstract Background Blackgram [Vigna mungo (L.) Hepper], is an important legume crop of Asia with limited genomic resources. We report a comprehensive set of genic simple sequence repeat (SSR) and single nucleotide polymorphism (SNPs) markers using Illumina MiSeq sequencing of transcriptome and its...

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Bibliographic Details
Main Authors: Avi Raizada, J. Souframanien
Format: Article
Language:English
Published: BMC 2019-08-01
Series:BMC Plant Biology
Subjects:
Wild blackgram
Transcriptome
Simple sequence repeat (SSR)
SNP genotyping
High resolution melting (HRM)
Online Access:http://link.springer.com/article/10.1186/s12870-019-1954-0

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http://link.springer.com/article/10.1186/s12870-019-1954-0

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