SaAlign: Multiple DNA/RNA sequence alignment and phylogenetic tree construction tool for ultra-large datasets and ultra-long sequences based on suffix array

SaAlign: Multiple DNA/RNA sequence alignment and phylogenetic tree construction tool for ultra-large datasets and ultra-long sequences based on suffix array

Multiple DNA/RNA sequence alignment is an important fundamental tool in bioinformatics, especially for phylogenetic tree construction. With DNA-sequencing improvements, the amount of bioinformatics data is constantly increasing, and various tools need to be iterated constantly. Mitochondrial genome...

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Bibliographic Details
Main Authors: Ziyuan Wang, Junjie Tan, Yanling Long, Yijia Liu, Wenyan Lei, Jing Cai, Yi Yang, Zhibin Liu
Format: Article
Language:English
Published: Elsevier 2022-01-01
Series:Computational and Structural Biotechnology Journal
Subjects:
Sequence analysis
Alignment
Phylogenetic tree
Suffix array
Online Access:http://www.sciencedirect.com/science/article/pii/S2001037022000939

Internet

http://www.sciencedirect.com/science/article/pii/S2001037022000939

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