RHybridFinder: An R package to process immunopeptidomic data for putative hybrid peptide discovery

RHybridFinder: An R package to process immunopeptidomic data for putative hybrid peptide discovery

Summary: Identification of proteasomal spliced peptides (PSPs) by mass spectrometry (MS) is not possible with traditional search engines. Here, we provide a protocol for running RHybridFinder (RHF), an R package for the computational inference of putative PSPs detected by MS. RHF extracts high confi...

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Bibliographic Details
Main Authors: Frederic Saab, David J. Hamelin, Qing Ma, Kevin A. Kovalchik, Isabelle Sirois, Pouya Faridi, Chen Li, Anthony W. Purcell, Peter Kubiniok, Etienne Caron
Format: Article
Language:English
Published: Elsevier 2021-12-01
Series:STAR Protocols
Subjects:
Bioinformatics
Cancer
Computer sciences
Immunology
Mass Spectrometry
Online Access:http://www.sciencedirect.com/science/article/pii/S2666166721005815

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http://www.sciencedirect.com/science/article/pii/S2666166721005815

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