Evaluation of classification in single cell atac-seq data with machine learning methods

Evaluation of classification in single cell atac-seq data with machine learning methods

Abstract Background The technologies advances of single-cell Assay for Transposase Accessible Chromatin using sequencing (scATAC-seq) allowed to generate thousands of single cells in a relatively easy and economic manner and it is rapidly advancing the understanding of the cellular composition of co...

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Bibliographic Details
Main Authors: Hongzhe Guo, Zhongbo Yang, Tao Jiang, Shiqi Liu, Yadong Wang, Zhe Cui
Format: Article
Language:English
Published: BMC 2022-09-01
Series:BMC Bioinformatics
Subjects:
scATAC-seq
Machine learning
Cell-type classification
Evaluation
SVM
Online Access:https://doi.org/10.1186/s12859-022-04774-z

Internet

https://doi.org/10.1186/s12859-022-04774-z

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