Patient‐ and xenograft‐derived organoids recapitulate pediatric brain tumor features and patient treatments

Abstract Brain tumors are the leading cause of cancer‐related death in children. Experimental in vitro models that faithfully capture the hallmarks and tumor heterogeneity of pediatric brain cancers are limited and hard to establish. We present a protocol that enables efficient generation, expansion...

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Main Authors: Chiara Lago, Aniello Federico, Gloria Leva, Norman L Mack, Benjamin Schwalm, Claudio Ballabio, Matteo Gianesello, Luana Abballe, Isabella Giovannoni, Sofia Reddel, Sabrina Rossi, Nicolas Leone, Andrea Carai, Angela Mastronuzzi, Alessandra Bisio, Alessia Soldano, Concetta Quintarelli, Franco Locatelli, Marcel Kool, Evelina Miele, Luca Tiberi
Format: Article
Language:English
Published: Springer Nature 2023-11-01
Series:EMBO Molecular Medicine
Subjects:
Online Access:https://doi.org/10.15252/emmm.202318199
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author Chiara Lago
Aniello Federico
Gloria Leva
Norman L Mack
Benjamin Schwalm
Claudio Ballabio
Matteo Gianesello
Luana Abballe
Isabella Giovannoni
Sofia Reddel
Sabrina Rossi
Nicolas Leone
Andrea Carai
Angela Mastronuzzi
Alessandra Bisio
Alessia Soldano
Concetta Quintarelli
Franco Locatelli
Marcel Kool
Evelina Miele
Luca Tiberi
author_facet Chiara Lago
Aniello Federico
Gloria Leva
Norman L Mack
Benjamin Schwalm
Claudio Ballabio
Matteo Gianesello
Luana Abballe
Isabella Giovannoni
Sofia Reddel
Sabrina Rossi
Nicolas Leone
Andrea Carai
Angela Mastronuzzi
Alessandra Bisio
Alessia Soldano
Concetta Quintarelli
Franco Locatelli
Marcel Kool
Evelina Miele
Luca Tiberi
author_sort Chiara Lago
collection DOAJ
description Abstract Brain tumors are the leading cause of cancer‐related death in children. Experimental in vitro models that faithfully capture the hallmarks and tumor heterogeneity of pediatric brain cancers are limited and hard to establish. We present a protocol that enables efficient generation, expansion, and biobanking of pediatric brain cancer organoids. Utilizing our protocol, we have established patient‐derived organoids (PDOs) from ependymomas, medulloblastomas, low‐grade glial tumors, and patient‐derived xenograft organoids (PDXOs) from medulloblastoma xenografts. PDOs and PDXOs recapitulate histological features, DNA methylation profiles, and intratumor heterogeneity of the tumors from which they were derived. We also showed that PDOs can be xenografted. Most interestingly, when subjected to the same routinely applied therapeutic regimens, PDOs respond similarly to the patients. Taken together, our study highlights the potential of PDOs and PDXOs for research and translational applications for personalized medicine.
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spelling doaj.art-27709dc824264046a65fac5ef01127a42024-10-28T08:48:29ZengSpringer NatureEMBO Molecular Medicine1757-46761757-46842023-11-01151212810.15252/emmm.202318199Patient‐ and xenograft‐derived organoids recapitulate pediatric brain tumor features and patient treatmentsChiara Lago0Aniello Federico1Gloria Leva2Norman L Mack3Benjamin Schwalm4Claudio Ballabio5Matteo Gianesello6Luana Abballe7Isabella Giovannoni8Sofia Reddel9Sabrina Rossi10Nicolas Leone11Andrea Carai12Angela Mastronuzzi13Alessandra Bisio14Alessia Soldano15Concetta Quintarelli16Franco Locatelli17Marcel Kool18Evelina Miele19Luca Tiberi20Armenise‐Harvard Laboratory of Brain Disorders and Cancer, CIBIOHopp Children's Cancer Center (KiTZ)Armenise‐Harvard Laboratory of Brain Disorders and Cancer, CIBIOHopp Children's Cancer Center (KiTZ)Hopp Children's Cancer Center (KiTZ)Armenise‐Harvard Laboratory of Brain Disorders and Cancer, CIBIOArmenise‐Harvard Laboratory of Brain Disorders and Cancer, CIBIODepartment of Onco‐Hematology, Cell and Gene Therapy, Bambino Gesù Children's Hospital, Scientific Institute for Research, Hospitalization and Healthcare (IRCCS)Pathology Unit, Bambino Gesù Children's Hospital, IRCCSDepartment of Onco‐Hematology, Cell and Gene Therapy, Bambino Gesù Children's Hospital, Scientific Institute for Research, Hospitalization and Healthcare (IRCCS)Pathology Unit, Bambino Gesù Children's Hospital, IRCCSPathology Unit, Bambino Gesù Children's Hospital, IRCCSNeurosurgery Unit, Department of Neurosciences, Bambino Gesù Children's Hospital, IRCCSDepartment of Onco‐Hematology, Cell and Gene Therapy, Bambino Gesù Children's Hospital, Scientific Institute for Research, Hospitalization and Healthcare (IRCCS)Laboratory of Radiobiology, CIBIODepartment of Neuroscience, Scuola Internazionale Superiore di Studi Avanzati (SISSA)Department of Onco‐Hematology, Cell and Gene Therapy, Bambino Gesù Children's Hospital, Scientific Institute for Research, Hospitalization and Healthcare (IRCCS)Department of Onco‐Hematology, Cell and Gene Therapy, Bambino Gesù Children's Hospital, Scientific Institute for Research, Hospitalization and Healthcare (IRCCS)Hopp Children's Cancer Center (KiTZ)Department of Onco‐Hematology, Cell and Gene Therapy, Bambino Gesù Children's Hospital, Scientific Institute for Research, Hospitalization and Healthcare (IRCCS)Armenise‐Harvard Laboratory of Brain Disorders and Cancer, CIBIOAbstract Brain tumors are the leading cause of cancer‐related death in children. Experimental in vitro models that faithfully capture the hallmarks and tumor heterogeneity of pediatric brain cancers are limited and hard to establish. We present a protocol that enables efficient generation, expansion, and biobanking of pediatric brain cancer organoids. Utilizing our protocol, we have established patient‐derived organoids (PDOs) from ependymomas, medulloblastomas, low‐grade glial tumors, and patient‐derived xenograft organoids (PDXOs) from medulloblastoma xenografts. PDOs and PDXOs recapitulate histological features, DNA methylation profiles, and intratumor heterogeneity of the tumors from which they were derived. We also showed that PDOs can be xenografted. Most interestingly, when subjected to the same routinely applied therapeutic regimens, PDOs respond similarly to the patients. Taken together, our study highlights the potential of PDOs and PDXOs for research and translational applications for personalized medicine.https://doi.org/10.15252/emmm.202318199brain tumorsorganoidspatient‐derivedpediatric cancertranslational applications
spellingShingle Chiara Lago
Aniello Federico
Gloria Leva
Norman L Mack
Benjamin Schwalm
Claudio Ballabio
Matteo Gianesello
Luana Abballe
Isabella Giovannoni
Sofia Reddel
Sabrina Rossi
Nicolas Leone
Andrea Carai
Angela Mastronuzzi
Alessandra Bisio
Alessia Soldano
Concetta Quintarelli
Franco Locatelli
Marcel Kool
Evelina Miele
Luca Tiberi
Patient‐ and xenograft‐derived organoids recapitulate pediatric brain tumor features and patient treatments
EMBO Molecular Medicine
brain tumors
organoids
patient‐derived
pediatric cancer
translational applications
title Patient‐ and xenograft‐derived organoids recapitulate pediatric brain tumor features and patient treatments
title_full Patient‐ and xenograft‐derived organoids recapitulate pediatric brain tumor features and patient treatments
title_fullStr Patient‐ and xenograft‐derived organoids recapitulate pediatric brain tumor features and patient treatments
title_full_unstemmed Patient‐ and xenograft‐derived organoids recapitulate pediatric brain tumor features and patient treatments
title_short Patient‐ and xenograft‐derived organoids recapitulate pediatric brain tumor features and patient treatments
title_sort patient and xenograft derived organoids recapitulate pediatric brain tumor features and patient treatments
topic brain tumors
organoids
patient‐derived
pediatric cancer
translational applications
url https://doi.org/10.15252/emmm.202318199
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