Applications and Comparison of Dimensionality Reduction Methods for Microbiome Data

Applications and Comparison of Dimensionality Reduction Methods for Microbiome Data

Dimensionality reduction techniques are a key component of most microbiome studies, providing both the ability to tractably visualize complex microbiome datasets and the starting point for additional, more formal, statistical analyses. In this review, we discuss the motivation for applying dimension...

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Bibliographic Details
Main Authors: George Armstrong, Gibraan Rahman, Cameron Martino, Daniel McDonald, Antonio Gonzalez, Gal Mishne, Rob Knight
Format: Article
Language:English
Published: Frontiers Media S.A. 2022-02-01
Series:Frontiers in Bioinformatics
Subjects:
microbiome
dimensionality reduction
ordination
sequencing data
non-linear embeddings
Online Access:https://www.frontiersin.org/articles/10.3389/fbinf.2022.821861/full

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https://www.frontiersin.org/articles/10.3389/fbinf.2022.821861/full

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