A benchmark of transposon insertion detection tools using real data

A benchmark of transposon insertion detection tools using real data

Abstract Background Transposable elements (TEs) are an important source of genomic variability in eukaryotic genomes. Their activity impacts genome architecture and gene expression and can lead to drastic phenotypic changes. Therefore, identifying TE polymorphisms is key to better understand the lin...

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Bibliographic Details
Main Authors: Pol Vendrell-Mir, Fabio Barteri, Miriam Merenciano, Josefa González, Josep M. Casacuberta, Raúl Castanera
Format: Article
Language:English
Published: BMC 2019-12-01
Series:Mobile DNA
Subjects:
Benchmark
Transposable elements
Polymorphism
Transposon insertion
Resequencing
Online Access:https://doi.org/10.1186/s13100-019-0197-9

Internet

https://doi.org/10.1186/s13100-019-0197-9

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