GrapHi-C: graph-based visualization of Hi-C datasets

Abstract Objectives Hi-C is a proximity-based ligation reaction used to detect regions of the genome that are close in 3D space (or “interacting”). Typically, results from Hi-C experiments (contact maps) are visualized as heatmaps or Circos plots. While informative, these visualizations do not direc...

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Bibliographic Details
Main Authors: Kimberly MacKay, Anthony Kusalik, Christopher H. Eskiw
Format: Article
Language:English
Published: BMC 2018-06-01
Series:BMC Research Notes
Subjects:
Online Access:http://link.springer.com/article/10.1186/s13104-018-3507-2