Position Weight Matrix, Gibbs Sampler, and the Associated Significance Tests in Motif Characterization and Prediction

Position weight matrix (PWM) is not only one of the most widely used bioinformatic methods, but also a key component in more advanced computational algorithms (e.g., Gibbs sampler) for characterizing and discovering motifs in nucleotide or amino acid sequences. However, few generally applicable stat...

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Bibliographic Details
Main Author: Xuhua Xia
Format: Article
Language:English
Published: Hindawi Limited 2012-01-01
Series:Scientifica
Online Access:http://dx.doi.org/10.6064/2012/917540