CamPype: an open-source workflow for automated bacterial whole-genome sequencing analysis focused on Campylobacter

Abstract Background The rapid expansion of Whole-Genome Sequencing has revolutionized the fields of clinical and food microbiology. However, its implementation as a routine laboratory technique remains challenging due to the growth of data at a faster rate than can be effectively analyzed and critic...

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Bibliographic Details
Main Authors: Irene Ortega-Sanz, José A. Barbero-Aparicio, Antonio Canepa-Oneto, Jordi Rovira, Beatriz Melero
Format: Article
Language:English
Published: BMC 2023-07-01
Series:BMC Bioinformatics
Subjects:
Online Access:https://doi.org/10.1186/s12859-023-05414-w