Random ultrametric trees and applications*

Random ultrametric trees and applications*

Ultrametric trees are trees whose leaves lie at the same distance from the root. They are used to model the genealogy of a population of particles co-existing at the same point in time. We show how the boundary of an ultrametric tree, like any compact ultrametric space, can be represented in a simpl...

Volledige beschrijving

Bibliografische gegevens
Hoofdauteur:	Lambert Amaury
Formaat:	Artikel
Taal:	English
Gepubliceerd in:	EDP Sciences 2017-01-01
Reeks:	ESAIM: Proceedings and Surveys
Onderwerpen:	random tree real tree reduced tree coalescent point process branching process random point measure allelic partition regenerative set coalescent comb phylogenetics population dynamics population genetics
Online toegang:	https://doi.org/10.1051/proc/201760070

Gelijkaardige items

TINNiK: inference of the tree of blobs of a species network under the coalescent model
door: Elizabeth S. Allman, et al.
Gepubliceerd in: (2024-11-01)

Short branch attraction in phylogenomic inference under the multispecies coalescent
door: Liang Liu, et al.
Gepubliceerd in: (2023-06-01)

Embedding gene trees into phylogenetic networks by conflict resolution algorithms
door: Marcin Wawerka, et al.
Gepubliceerd in: (2022-05-01)

Roman domination excellent graphs‎: ‎trees
door: Vladimir Samodivkin
Gepubliceerd in: (2018-01-01)

OCTAL: Optimal Completion of gene trees in polynomial time
door: Sarah Christensen, et al.
Gepubliceerd in: (2018-03-01)

Identifying model violations under the multispecies coalescent model using P2C2M.SNAPP
door: Drew J. Duckett, et al.
Gepubliceerd in: (2020-01-01)

Isomorphism of Trees and Isometry of Ultrametric Spaces
door: Oleksiy Dovgoshey
Gepubliceerd in: (2020-09-01)

Plastome phylogenomic study of Gentianeae (Gentianaceae): widespread gene tree discordance and its association with evolutionary rate heterogeneity of plastid genes
door: Xu Zhang, et al.
Gepubliceerd in: (2020-07-01)

A Computational Approach for Modeling the Allele Frequency Spectrum of Populations with Arbitrarily Varying Size
door: Hua Chen
Gepubliceerd in: (2019-12-01)

STELAR: a statistically consistent coalescent-based species tree estimation method by maximizing triplet consistency
door: Mazharul Islam, et al.
Gepubliceerd in: (2020-02-01)

Population genetics: coalescence rate and demographic parameters inference
door: Mazet, Olivier, et al.
Gepubliceerd in: (2023-06-01)

On the size of the block of 1 for <italic>Ξ</italic>-coalescents with dust
door: Fabian Freund, et al.
Gepubliceerd in: (2017-12-01)

Gene tree parsimony for incomplete gene trees: addressing true biological loss
door: Md Shamsuzzoha Bayzid, et al.
Gepubliceerd in: (2018-01-01)

Legofit: estimating population history from genetic data
door: Alan R. Rogers
Gepubliceerd in: (2019-10-01)

Appropriate Assignment of Fossil Calibration Information Minimizes the Difference between Phylogenetic and Pedigree Mutation Rates in Humans
door: Renata T. Capellão, et al.
Gepubliceerd in: (2018-10-01)

A Phylogenomic Perspective on Evolution and Discordance in the Alpine-Arctic Plant Clade Micranthes (Saxifragaceae)
door: Rebecca L. Stubbs, et al.
Gepubliceerd in: (2020-02-01)

Exact median-tree inference for unrooted reconciliation costs
door: Paweł Górecki, et al.
Gepubliceerd in: (2020-10-01)

Design and Analysis of Distributed Tree Growing Algorithms
door: Marcio Nunes De Miranda, et al.
Gepubliceerd in: (2022-01-01)

Weighted ASTRID: fast and accurate species trees from weighted internode distances
door: Baqiao Liu, et al.
Gepubliceerd in: (2023-07-01)

Minimal-assumption inference from population-genomic data
door: Daniel B Weissman, et al.
Gepubliceerd in: (2017-07-01)

Employing phylogenetic tree shape statistics to resolve the underlying host population structure
door: Hassan W. Kayondo, et al.
Gepubliceerd in: (2021-11-01)

Understanding the tree of life: an overview of tree-reading skill frameworks
door: Thilo Schramm, et al.
Gepubliceerd in: (2019-04-01)

A Novel Random Split Point Procedure Using Extremely Randomized (Extra) Trees Ensemble Method for Human Activity Recognition
door: B Padmaja, et al.
Gepubliceerd in: (2020-05-01)

A coarse-graining, ultrametric approach to resolve the phylogeny of prokaryotic strains with frequent homologous recombination
door: Tin Yau Pang
Gepubliceerd in: (2020-05-01)

Optimal Prefetching in Random Trees
door: Kausthub Keshava, et al.
Gepubliceerd in: (2021-10-01)

AllCoPol: inferring allele co-ancestry in polyploids
door: Ulrich Lautenschlager, et al.
Gepubliceerd in: (2020-10-01)

Population expansions shared among coexisting bacterial lineages are revealed by genetic evidence
door: Morena Avitia, et al.
Gepubliceerd in: (2014-12-01)

Predicting spatiotemporal variability in radial tree growth at the continental scale with machine learning
door: Paul Bodesheim, et al.
Gepubliceerd in: (2022-01-01)

Testing for selection on color and pattern in a mimetic radiation
door: Justin YEAGER, Jason L. BROWN, Victor MORALES, Molly CUMMINGS5, Kyle SUMMERS
Gepubliceerd in: (2012-08-01)

Computational Fluid Dynamic Simulation of Dispersed Oil-Water Flow with New Drop Coalescence Model
door: A. A. Amooey, et al.
Gepubliceerd in: (2019-01-01)

On The Nullity of Generalized Rooted T-Tuple With B-Bridge Coalescence Graphs
door: Nechirvan B. Ibrahim
Gepubliceerd in: (2016-06-01)

Coalescence of concentrated emulsions in microfluidic constrictions through avalanches
door: Emma Hinderink, et al.
Gepubliceerd in: (2025-02-01)

On trees and the multiplicative sum Zagreb index
door: M‎. ‎Eliasi, et al.
Gepubliceerd in: (2016-06-01)

EXTRA TREES METHOD FOR STOCK PRICE FORECASTING WITH ROLLING ORIGIN ACCURACY EVALUATION
door: Dani Al Mahkya, et al.
Gepubliceerd in: (2022-07-01)

PhyloMissForest: a random forest framework to construct phylogenetic trees with missing data
door: Diogo Pinheiro, et al.
Gepubliceerd in: (2022-05-01)

Adaptive Metropolis-coupled MCMC for BEAST 2
door: Nicola F. Müller, et al.
Gepubliceerd in: (2020-09-01)

Comparison of phylogenetic trees defined on different but mutually overlapping sets of taxa: A review
door: Wanlin Li, et al.
Gepubliceerd in: (2024-08-01)

Distinguishing neutral from deleterious mutations in growing populations
door: Gregory Bruce Ewing, et al.
Gepubliceerd in: (2014-01-01)

Phylogeny and species delimitation of ciliates in the genus Spirostomum (class Heterotrichea) using single-cell transcriptomes
door: Shahed Uddin Ahmed Shazib, et al.
Gepubliceerd in: (2025-02-01)

Phylotranscriptomic discordance is best explained by incomplete lineage sorting within Allium subgenus Cyathophora and thus hemiplasy accounts for interspecific trait transition
door: Zengzhu Zhang, et al.
Gepubliceerd in: (2024-01-01)