Divide and Conquer (DC) BLAST: fast and easy BLAST execution within HPC environments

Divide and Conquer (DC) BLAST: fast and easy BLAST execution within HPC environments

Bioinformatics is currently faced with very large-scale data sets that lead to computational jobs, especially sequence similarity searches, that can take absurdly long times to run. For example, the National Center for Biotechnology Information (NCBI) Basic Local Alignment Search Tool (BLAST and BLA...

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Bibliographic Details
Main Authors: Won Cheol Yim, John C. Cushman
Format: Article
Language:English
Published: PeerJ Inc. 2017-06-01
Series:PeerJ
Subjects:
BLAST
Sequence similarity
Parallel processing
Environment
Distributed computing
HPC
Online Access:https://peerj.com/articles/3486.pdf

Internet

https://peerj.com/articles/3486.pdf

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