Coordinates and intervals in graph-based reference genomes

Coordinates and intervals in graph-based reference genomes

Abstract Background It has been proposed that future reference genomes should be graph structures in order to better represent the sequence diversity present in a species. However, there is currently no standard method to represent genomic intervals, such as the positions of genes or transcription f...

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Bibliographic Details
Main Authors: Knut D. Rand, Ivar Grytten, Alexander J. Nederbragt, Geir O. Storvik, Ingrid K. Glad, Geir K. Sandve
Format: Article
Language:English
Published: BMC 2017-05-01
Series:BMC Bioinformatics
Subjects:
Pan-genome
Sequence graphs
Reference genome
Epigenomics
Online Access:http://link.springer.com/article/10.1186/s12859-017-1678-9

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http://link.springer.com/article/10.1186/s12859-017-1678-9

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