Gene regulation network inference using k-nearest neighbor-based mutual information estimation: revisiting an old DREAM

Abstract Background A cell exhibits a variety of responses to internal and external cues. These responses are possible, in part, due to the presence of an elaborate gene regulatory network (GRN) in every single cell. In the past 20 years, many groups worked on reconstructing the topological structur...

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Bibliographic Details
Main Authors: Lior I. Shachaf, Elijah Roberts, Patrick Cahan, Jie Xiao
Format: Article
Language:English
Published: BMC 2023-03-01
Series:BMC Bioinformatics
Subjects:
Online Access:https://doi.org/10.1186/s12859-022-05047-5