NAUTICA: classifying transcription factor interactions by positional and protein-protein interaction information

NAUTICA: classifying transcription factor interactions by positional and protein-protein interaction information

Abstract Background Inferring the mechanisms that drive transcriptional regulation is of great interest to biologists. Generally, methods that predict physical interactions between transcription factors (TFs) based on positional information of their binding sites (e.g. chromatin immunoprecipitation...

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Bibliographic Details
Main Authors: Stefano Perna, Pietro Pinoli, Stefano Ceri, Limsoon Wong
Format: Article
Language:English
Published: BMC 2020-09-01
Series:Biology Direct
Subjects:
Transcription factors
Interaction classification
Protein−protein interactions
TF-TF competition
Data-driven analysis
Online Access:http://link.springer.com/article/10.1186/s13062-020-00268-1

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http://link.springer.com/article/10.1186/s13062-020-00268-1

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