Predicting gene expression state and prioritizing putative enhancers using 5hmC signal

Abstract Background Like its parent base 5-methylcytosine (5mC), 5-hydroxymethylcytosine (5hmC) is a direct epigenetic modification of cytosines in the context of CpG dinucleotides. 5hmC is the most abundant oxidized form of 5mC, generated through the action of TET dioxygenases at gene bodies of act...

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Bibliographic Details
Main Authors: Edahi Gonzalez-Avalos, Atsushi Onodera, Daniela Samaniego-Castruita, Anjana Rao, Ferhat Ay
Format: Article
Language:English
Published: BMC 2024-06-01
Series:Genome Biology
Online Access:https://doi.org/10.1186/s13059-024-03273-z