Symbiont-screener: A reference-free tool to separate host sequences from symbionts for error-prone long reads

Symbiont-screener: A reference-free tool to separate host sequences from symbionts for error-prone long reads

Metagenomic sequencing facilitates large-scale constitutional analysis and functional characterization of complex microbial communities without cultivation. Recent advances in long-read sequencing techniques utilize long-range information to simplify repeat-aware metagenomic assembly puzzles and com...

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Bibliographic Details
Main Authors: Mengyang Xu, Lidong Guo, Yanwei Qi, Chengcheng Shi, Xiaochuan Liu, Jianwei Chen, Jinglin Han, Li Deng, Xin Liu, Guangyi Fan
Format: Article
Language:English
Published: Frontiers Media S.A. 2023-01-01
Series:Frontiers in Marine Science
Subjects:
symbiosis
decontamination
metagenomic sequencing
long reads
bioinformatics
alignment-free
Online Access:https://www.frontiersin.org/articles/10.3389/fmars.2023.1087447/full

Internet

https://www.frontiersin.org/articles/10.3389/fmars.2023.1087447/full

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