A Comparison of Cell-Cell Interaction Prediction Tools Based on scRNA-seq Data

A Comparison of Cell-Cell Interaction Prediction Tools Based on scRNA-seq Data

Computational prediction of cell-cell interactions (CCIs) is becoming increasingly important for understanding disease development and progression. We present a benchmark study of available CCI prediction tools based on single-cell RNA sequencing (scRNA-seq) data. By comparing prediction outputs wit...

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Bibliographic Details
Main Authors: Zihong Xie, Xuri Li, Antonio Mora
Format: Article
Language:English
Published: MDPI AG 2023-08-01
Series:Biomolecules
Subjects:
cell-cell interactions (CCIs)
single-cell RNA-seq (scRNA-seq)
idiopathic pulmonary fibrosis (IPF)
CellPhoneDB
NATMI
scMLnet
Online Access:https://www.mdpi.com/2218-273X/13/8/1211

Internet

https://www.mdpi.com/2218-273X/13/8/1211

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