IDOPS, a Profile HMM-Based Tool to Detect Pesticidal Sequences and Compare Their Genetic Context

IDOPS, a Profile HMM-Based Tool to Detect Pesticidal Sequences and Compare Their Genetic Context

Biopesticide-based crop protection is constantly challenged by insect resistance. Thus, expansion of available biopesticides is crucial for sustainable agriculture. Although Bacillus thuringiensis is the major agent for pesticide bioprotection, the number of bacteria species synthesizing proteins wi...

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Bibliographic Details
Main Authors: Stefani Díaz-Valerio, Anat Lev Hacohen, Raphael Schöppe, Heiko Liesegang
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-06-01
Series:Frontiers in Microbiology
Subjects:
biopesticide
hidden markov model
insecticidal protein
toxin identification
pesticidal
genetic context
Online Access:https://www.frontiersin.org/articles/10.3389/fmicb.2021.664476/full

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https://www.frontiersin.org/articles/10.3389/fmicb.2021.664476/full

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